New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2282026 = | 34 (0.780) | 5 (0.120) | 4/240 | NT | 12.5% | coding (805/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
? | NC_002947 | 2282071 = | 38 (0.930) | coding (850/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
ATGCACTGGCCGGGCTATACCATCACTATGTGCAGCGCGACAACACGCTGTTGCGCATGCTGCCTTACAAGTAACCGCGTCGCCCCTGCAGGCCACCCGTGTGTACGAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2282179‑2282026 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgatcTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGCGCTGCACATAGTGATGGTATAGCCCGGCCAGTGCATGCAAGCCGATCAGCCAGTAGCCCCAGCTGCCAATACGC > NC_002947/2282071‑2282217 ATGCACTGGCCGGGCTATACCATCACTATGTGCAGCGCGACAACACGCTGTTGCGCATGCTGCCTTACAAGTAACCGCGTCGCCCCTGCAGGCCACCCGTGTGTACGAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCT < 2:480737/150‑1 GCACTGGCCGGGCTATACCATCACTATGTGCAGCGCGACAACACGCTGTTGCGCATGCTGCCTTACAAGTAACCGCGTCGCCCCTGCAGGCCACCCGTGTGTACGAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCTGA < 1:656318/150‑1 ACTGGCCGGGCTATACCATCACTATGTGCAGCGCGACAACCCCCTGTTGCGCATGCTGCCTTACAAGTAACCGCGTCGCCCCTGCAGGCCACCCGTGTGTACGAAGCTCAGGCGGCTGCCGGCCTTGAACAGCCCCGCCGCAACCTGATC > 1:169930/1‑150 TATGTGCAGCGCGACAACACGCTGTTGCGCATGCTGCCTTACAAGTAACCGCGTCGCCCCTGCAGGCCACCCGTGTGTACGAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCT > 1:14434/1‑124 TATGTGCAGCGCGACAACACGCTGTTGCGCATGCTGCCTTACAAGTAACCGCGTCGCCCCTGCAGGCCACCCGTGTGTACGAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCT < 2:14434/124‑1 GAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCTGATCTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGC > 1:551053/1‑103 GAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCTGATCTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGC < 2:551053/103‑1 GAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCTGATCTTCGTACACACGGGTGGCCCGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGC < 1:712805/121‑1 GAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCTGATCTTCGTACACACGGGTGGCCCGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGC > 2:712805/1‑121 GGCTGCCGGGCTTGAACAGCCCGGCAGCCGCCTGATCTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGCGCTGCACATAGTGATGGTATAGCCCGGCCAGTGCATGCAA > 2:72011/1‑150 TGATCTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGCGCTGCACATAGTGATGGTATAGCCCGGCCAGTGCATGCAAGCCGATCAGCCAGTAGCCCCAGCTGCCAATAC < 1:220877/150‑1 GATCTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGCGCTGCACATAGTGATGGTATAGCCCGGCCAGTGCATGCAAGCCGATCAGCCAGTAGCCCCAGCTGCCAATACG > 2:1084397/1‑150 ATCTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGCGCTGCACATAGTGATGGTATAGCCCGGCCAGTGCATGCAAGCCGATCAGCCAGTAGCCCCAGCTGCCAATACGC < 1:338110/150‑1 ATCTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGCGCTGCACATAGTGATGGTATAGCCCGGCCAGTGCATGCAAGCCGATCAGCCAGTAGCCCCAGCTGCCAATACGC > 1:723209/1‑150 ATGCACTGGCCGGGCTATACCATCACTATGTGCAGCGCGACAACACGCTGTTGCGCATGCTGCCTTACAAGTAACCGCGTCGCCCCTGCAGGCCACCCGTGTGTACGAAGATCAGGCGGCTGCCGGGCTTGAACAGCCCGGCAGCAACCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2282179‑2282026 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgatcTTCGTACACACGGGTGGCCTGCAGGGGCGACGCGGTTACTTGTAAGGCAGCATGCGCAACAGCGTGTTGTCGCGCTGCACATAGTGATGGTATAGCCCGGCCAGTGCATGCAAGCCGATCAGCCAGTAGCCCCAGCTGCCAATACGC > NC_002947/2282071‑2282217 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |