New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2895970 | 32 (0.740) | 5 (0.120) | 5/250 | NT | 13.4% | coding (97/714 nt) | PP_2550 | transcriptional regulator |
? | NC_002947 | = 2895991 | 33 (0.770) | coding (118/714 nt) | PP_2550 | transcriptional regulator |
AACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2895846‑2895970 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caTGTCGGGATCGGCACCCGACTTGGCCGCGATCTGGATTTCCTTGGACAGCTTGCCCATGATCTTGCCTTTGGCATTGGCCGCTGTTTCTCTATGTTT < NC_002947/2895991‑2895895 AACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGATGAAGTCGGGATCGGCACCCGACTTGGC < 1:30498/150‑1 AAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCATGTCGGGATCGGCACCCGACTTG < 1:799480/66‑1 AAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCATGTCGGGATCGGCACCCGACTTG > 2:799480/1‑66 CAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGGCCGCGATCTGGATTTCCTTGGACAGCTTGCCCATGATCTTGCCTTTGGCATTGGCCGCTGTTTCTCTATGTTT > 2:203408/1‑120 CAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGGCCGCGATCTGGATTTCCTTGGACAGCTTGCCCATGATCTTGAATTTGGCATTGGCCGCTGTTTCTCTATGTTT < 1:203408/120‑1 AACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2895846‑2895970 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caTGTCGGGATCGGCACCCGACTTGGCCGCGATCTGGATTTCCTTGGACAGCTTGCCCATGATCTTGCCTTTGGCATTGGCCGCTGTTTCTCTATGTTT < NC_002947/2895991‑2895895 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |