New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2895970 | 32 (0.740) | 5 (0.120) | 5/250 | NT | 13.4% | coding (97/714 nt) | PP_2550 | transcriptional regulator |
? | NC_002947 | = 2895991 | 33 (0.770) | coding (118/714 nt) | PP_2550 | transcriptional regulator |
CCACTTTTGGCCGGTCGCTTCCTGAACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCAAGGGCGCTGGCCTGGACGGTGATGCCGTGCAATACCATGCGGTG > NC_002947/2895822‑2896116 | ccACTTTTGGCCGGTCGCTTCCTGAACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCaa > 1:949232/1‑150 (MQ=255) cACTTTTGGCCGGTCGCTTCCTGAACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAg > 1:245315/1‑150 (MQ=255) gCTTCCTGAACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATccc > 1:328398/1‑150 (MQ=255) ttCCTGAACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGa < 1:948412/150‑1 (MQ=255) ttCCTGAACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGa < 2:529789/150‑1 (MQ=255) ccTGAACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACACTGTGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGCAATCTAGATCGCGGCCAAGTCGGGTGCCGATCCCGACa < 1:183850/150‑1 (MQ=255) aaCCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGATGAagtcgggatcggcacccgacttggc < 1:30498‑M1/150‑26 (MQ=255) ccGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCg < 2:874746/128‑1 (MQ=255) ccGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCg > 1:874746/1‑128 (MQ=255) gCCGCTGAAACAAGAGAGTCGACTTGGGCGCACAGTGGAACGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGACAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTACAGATCACGACATGAACCagc > 2:550459/1‑150 (MQ=255) gCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGGCATGAACCcgc < 2:441669/150‑1 (MQ=255) gCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCcgc < 1:291832/150‑1 (MQ=255) tGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCgcgcctg > 1:681079/1‑150 (MQ=255) aaGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGcgcctgcgcctg > 1:877317/1‑150 (MQ=255) gagTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCa < 2:328398/150‑1 (MQ=255) gTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATc < 1:928518/150‑1 (MQ=255) cgcACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCgcgcctgc < 1:736015/128‑1 (MQ=255) cgcACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCgcgcctgc > 2:736015/1‑128 (MQ=255) cacaGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGCCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCaaga > 2:1089579/1‑150 (MQ=255) ggAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTAAAACCGCCTACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCtt < 2:1122672/150‑1 (MQ=255) gAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTc > 2:428863/1‑150 (MQ=255) ccAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGt > 1:140129/1‑127 (MQ=255) caaaaCATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGt < 2:140129/125‑1 (MQ=255) aaaCATAGAGAAACAGCGGCCAATGCCAAATTCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCATGTCGGGATCGGCACCCGACTtggccgcgatctggatttccttg < 1:203408‑M2/120‑24 (MQ=255) aaaCATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCATGTCGGGATCGGCACCCGACTtggccgcgatctggatttccttg > 2:203408‑M2/1‑97 (MQ=255) gagaAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGCCCCGCgaga > 2:297123/1‑150 (MQ=255) gCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCt > 2:1061503/1‑146 (MQ=255) gCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCt < 1:1061503/146‑1 (MQ=255) ccAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCggg < 1:177343/150‑1 (MQ=255) ccAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCggg < 2:681079/150‑1 (MQ=255) cAATGCCAAAGGCAAGATCATGGGCAAGCTGGGCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGc > 1:213249/1‑150 (MQ=255) aaTGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCa > 2:827944/1‑150 (MQ=255) cAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCg > 2:1121562/1‑150 (MQ=255) aGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCaa < 2:7822/150‑1 (MQ=255) aaGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAtgtcgggatcggcacccgacttg > 2:799480‑M1/1‑43 (MQ=255) aaGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAtgtcgggatcggcacccgacttg < 1:799480‑M1/66‑24 (MQ=255) aaGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCGCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCAAGGgc > 2:502750/1‑150 (MQ=255) tCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCAAGGGCGCTg > 1:556281/1‑150 (MQ=255) ggTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCAAGGGCGCTGGCCTGGACGGTg < 2:245315/149‑1 (MQ=255) cAAGGAAATCCAGATCGCGGCCAagtcgggtgccgatcccgacatggccgcgatctggatttccttggacagcttgcccatgatcttgcctttggcattggccgctgtttctctatgttt > 2:203408‑M1/1‑23 (MQ=255) cAAGGAAATCCAGATCGCGGCCAagtcgggtgccgatcccgacatggccgcgatctggatttccttggacagcttgcccatgatcttgaatttggcattggccgctgtttctctatgttt < 1:203408‑M1/120‑98 (MQ=255) aaaTCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCAAGGGCGCTGGCCTGGACGGTGATGCCGTGc < 2:980171/150‑1 (MQ=255) aTCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCAAGGGCGCTGGCCTGGACGGTGATGCCGTGCaa > 1:374135/1‑150 (MQ=255) gCCAAGTCGGGTGCCGATCCCGACTtcatcgcgatctggatttccttggacagcttgcccatgatcttgcctttggcattggccgctgtttctctatgtttggctttccactgtgcgcccatgtcgactctcttgtttcagcggccggtt < 1:30498‑M2/150‑126 (MQ=255) gCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCGTCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCAAGGGCGCTGGCCTGGACGGTGATGCCGTGCAATACCATGCGGTg > 1:389362/1‑150 (MQ=255) cAAGTCGGGTGCCGATCCCGACAtggccgcgatctggatttccttggacagcttgcccatgatctt > 2:799480‑M2/1‑23 (MQ=255) cAAGTCGGGTGCCGATCCCGACAtggccgcgatctggatttccttggacagcttgcccatgatctt < 1:799480‑M2/66‑44 (MQ=255) | CCACTTTTGGCCGGTCGCTTCCTGAACCGGCCGCTGAAACAAGAGAGTCGACATGGGCGCACAGTGGAAAGCCAAACATAGAGAAACAGCGGCCAATGCCAAAGGCAAGATCATGGGCAAGCTGTCCAAGGAAATCCAGATCGCGGCCAAGTCGGGTGCCGATCCCGACATGAACCCGCGCCTGCGCCTGGCCATCGTGCAAGCCAAGAAGGCTTCGATGACCCGCGAGACCCTGGATCGGGCAATCCGCAAGGGCGCTGGCCTGGACGGTGATGCCGTGCAATACCATGCGGTG > NC_002947/2895822‑2896116 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |