New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2898241 =38 (0.880)4 (0.090) 4/250 NT 9.4% coding (423/1413 nt) PP_2552 DOPA decarboxylase
?NC_002947 2898266 = 40 (0.940)coding (448/1413 nt) PP_2552 DOPA decarboxylase

GTTCACGGGCACTGATCAGCGCCACCAGGGTGCTGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2898278‑2898241
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAG  >  NC_002947/2898266‑2898392
                                                                                                                                                                     
GTTCACGGGCACTGATCAGCGCCACCAGGGTGCTGGTCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTCTGTCAACGCCCCCGCCCACAGCTCGGTGGACCAGG                 >  2:497556/1‑150
            TGATCAGCGCCACCAGGGTGCTGGTCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGC                                                                            <  1:1126160/79‑1
            TGATCAGCGCCACCAGGGTGCTGGTCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGC                                                                            >  2:1126160/1‑79
               TCAGCGCCACCAGGGTGCTGATCAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAG  >  1:772860/1‑150
                                                                                                                                                                     
GTTCACGGGCACTGATCAGCGCCACCAGGGTGCTGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2898278‑2898241
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcAGTGCCCGTGAACGCGCCACTGACTACGCCCTGGTACGTGGTGGCCTGCAGGCCGAGCCCAAGCCTTTGATCGTGTATGTCAGCGCCCACGCCCACAGCTCGGTGGACAAGGCTGCACTGCTGGCAG  >  NC_002947/2898266‑2898392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.