New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3152372	45 (1.040)	3 (0.070)	3/236	NT	6.3%	coding (484/882 nt)	PP_2768	branched‑chain amino acid ABC transporter permease
	?	NC_002947	= 3152388	48 (1.190)					coding (500/882 nt)	PP_2768	branched‑chain amino acid ABC transporter permease

GGCCATCAGCGACGCCCCGCTGGAGCTGGGCGGCCTGCTGCTGTCGCAGTTCGACCTGTTCGCCGCCGCAACGGCGGCGGCCCTGGTGGTGCTTCTGTCCTTGCTGTTCAACCGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3152254‑3152372 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcacgcAGCGCCAGGCCGATGCGCGTGCGGTTGAACAGCAAGGACAGAAGCACCACCAGGGCCGCCGCCGTTGCGGCGGCGAACAGGTCGAACTGCGACAGCAGCAGGCCGCCCAGCTCCAGCGGGGCGTCGCTGATGGCCAGCTCCAGGC  <  NC_002947/3152388‑3152244                                                                                                                                                                                                                                                                          GGCCATCAGCGACGCCCCGCTGGAGCTGGGCGGCCTGCTGCTGTCGCAGTTCGACCTGTTCGCCGCCGCAACGGCGGCGGCCCTGGTGGTGCTTCTGTCCTGGCTGTTCAACCGCACGCAGCGCCAGGCCGATGCGCGTGCGGTTGAACA                                                                                                                    <  2:437876/150‑1                                    TGCTGCTGTCGCAGTTCGACCTGTTCGCCGCCGCAACGGCGGCGGCCCTGGTGGTGCTTCTGTCCTTGCTGTTCAACCGCACGCAGCGCCAGGCCGATGCGCGTGCGGT                                                                                                                          >  2:239504/1‑109                                    TGCTGCGGTCGCAGTTCGACCTGTTCGCCGCCGCAACGGCGGCGGCCCTGGTGGTGCTTCTGTCCTTGCTGTTCAACCGCACGCAGCGCCAGGCCGATGCGCGTGCGGT                                                                                                                          <  1:239504/109‑1                                                                                                                  GCACGCAGCGCCAGGCCGATGCGCGTGCGGTTGAACAGCAAGGACAGAAGCACCACCAGGGCCGCCGCCGTTGCGGCGGCGAACAGGTCGAACTGCGACAGCAGCAGGCCGCCCAGCTCCAGCGGGGCGTCGCTGATGGCCAGCGCCAGG   >  1:405033/1‑150                                                                                                                   CACGCAGCGCCAGGCCGATGCGCGTGCGGTTGAACAGCAAGGACAGAAGCACCACCAGGGCCGCCGCCGTTGCGGCGGCGAACAGGTCGAACTGCGACAGCAGCAGGCCGCCCAGCTCCAGCGGGGCGTCGCTGATGGCCAGCTCCAGGC  <  1:895182/150‑1                                                                                                                                                                                                                                                                          GGCCATCAGCGACGCCCCGCTGGAGCTGGGCGGCCTGCTGCTGTCGCAGTTCGACCTGTTCGCCGCCGCAACGGCGGCGGCCCTGGTGGTGCTTCTGTCCTTGCTGTTCAACCGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3152254‑3152372 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcacgcAGCGCCAGGCCGATGCGCGTGCGGTTGAACAGCAAGGACAGAAGCACCACCAGGGCCGCCGCCGTTGCGGCGGCGAACAGGTCGAACTGCGACAGCAGCAGGCCGCCCAGCTCCAGCGGGGCGTCGCTGATGGCCAGCTCCAGGC  <  NC_002947/3152388‑3152244

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.