| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3390905 | 37 (0.850) | 4 (0.100) | 4/238 | NT | 10.6% | coding (72/1257 nt) | PP_2994 | FMN‑binding oxidoreductase |
| ? | NC_002947 | = 3390913 | 33 (0.810) | coding (80/1257 nt) | PP_2994 | FMN‑binding oxidoreductase | |||||
ATCGACTGACCTTGAAAAAGGTATTGACCTTAAAGTCGACTTCAAACTTAAGGTGGCCGCATTTCCAGTTGAGGACTGCTCCATGAATGTGTTCGACACCCTGATGCTTCCCAACGGTTCGACCGTCAAGAACCGAATCGCCAAAGCCGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3390752‑3390905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccatgTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCACCTTAAGTTTGAAGTCGACTTTAAGGTCAATACCTTTT < NC_002947/3390913‑3390767 ATCGACTGACCTTGAAAAAGGTATTGACCTTAAAGTCGACTTCAAACTTAAGGTGGCCGCATTTCCAGTTGAGGACTGCTCCATGAATGTGTTCGACACCCTGATGCTTCCCAACGGTTCGACCGTCAAGAACCGAATCGCCAAAGCCGC > 2:77912/1‑150 TCGACTGACCTTGAAAAAGGTATTGACCTTAAAGTCGACTTCAAACTTAAGGTGGCCGCATTTCCAGTTGAGGACTGCTCCATGAATGTGTTCGACACCCTGCTGCTTCCCAACGGTTCGACCGGCAAGAACCGGATCGCCAAAGCCGCC > 1:184773/1‑150 AAAGGTATTGACCTTAAAGTCGACTTCAAACTTAAGGTGGCCGCATTTCCAGTTGAGGACTGCTCCATGAATGTGTTCGACACCCTGATGCTTCCCCACGGTTCGACCGTCAAGAACCGAATCGCCAAAGCCGCCATGTTCTCTTCCATG > 1:514119/1‑150 CGACTTCAAACTTAAGGTGGCCGCATTTCCAGTGGAGGCCGGCTCAATGAATGTGTTCGACACCCTGAGGCTTCCCAACGGTTCGACCGTCAAGAACCGAATCGCCAAAGCCGCCATGTTCTCTTCCATGGCGGCTTTGGCGAGTCGGTT < 2:514119/150‑1 TTCCCAACGGTTCGACCGTCAAGAACCGAATCGCCAAAGCCGCCATGTTCTCTTCCATGGCGGCTTTGGCGATT > 1:617677/1‑74 TTCCCAACGGTTCGACCGTCAAGAACCGAATCGCCAAAGCCGCCATGTTCTCTTCCATGGCGGCTTTGGCGATT < 2:617677/74‑1 CGCCATGTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCACCTTAAGTTTGAAGTCGACTTTAAGGTCAATACC > 2:7124/1‑150 GCCATGTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGC < 1:1070804/110‑1 GCCATGTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGC > 2:1070804/1‑110 CATGTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTTGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCA > 1:457522/1‑113 CATGTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTTGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCA < 2:457522/113‑1 CATGTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCACCTTAAGTTTGAAGTCGACTTTAAGGTCAATACCTTT > 2:663823/1‑150 CATGTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCACCTTAAGTTTGAAGTCGACTTTAAGGTCAATACCTTT < 2:670520/150‑1 ATGTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCACCTTAAGTTTGAAGTCGACTTTAAGGTCAATACCTTTT < 2:717686/150‑1 GTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCACCTTAAGTTTGAAGTC > 1:696946/1‑126 GTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCACCTTAAGTTTGAAGTC < 2:696946/126‑1 ATCGACTGACCTTGAAAAAGGTATTGACCTTAAAGTCGACTTCAAACTTAAGGTGGCCGCATTTCCAGTTGAGGACTGCTCCATGAATGTGTTCGACACCCTGATGCTTCCCAACGGTTCGACCGTCAAGAACCGAATCGCCAAAGCCGCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3390752‑3390905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccatgTTCTCTTCCATGGCGGCTTTGGCGATTCGGTTCTTGACGGTCGAACCGTTGGGAAGCATCAGGGTGTCGAACACATTCATGGAGCAGTCCTCAACTGGAAATGCGGCCACCTTAAGTTTGAAGTCGACTTTAAGGTCAATACCTTTT < NC_002947/3390913‑3390767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |