New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 379387250 (1.150)4 (0.100) 3/244 NT 7.9% coding (694/1191 nt) PP_3355 beta‑ketothiolase
?NC_002947 = 3793905 45 (1.080)coding (661/1191 nt) PP_3355 beta‑ketothiolase

CGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACTGTTGCCAGCCGTCTGCACGCCACCGGCGTGCACCGGGCGCAGTCGGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3793719‑3793872
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagGACAGCCACCCACGGCCTACCGACGCGGCCGCACTGGCCCGACTGCGCCCGGTGCACGCCGGTGGCGTGCAGACGGCTGGCAACAGTTGCGCGGTGGTCGATGGCGCGGCGGCAGCCTTGGTCACGCGCTACTCCGATTGCACTCATC  <  NC_002947/3793905‑3793758
                                                                                                                                                                                                                                                                                                              
CGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACTGTTGCCAGCCGTCTGCACGCCACCGGCGTGCACCGGGCGCAGTCGGG                                                                                                                                                          <  2:713332/150‑1
    AACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACTGTTGCCAGCCGTCTGCACGCCACCGGCGTGCACCGGGCGCAGTCGGGCCAG                                                                                                                                                      >  1:156314/1‑150
                                         TGAGTGCAATCGTAGTAGCGCGTGTCCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACTGTTGCCAGCCGTCTGCACGCCACCGGCGTGCACCGGGCGCAGTCGGGCCAGGACATTCACCCACGGCCTACCGACGCGGCCGCACTGG                                                                                                                 <  2:785402/150‑1
                                         TGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACTGTTGCCAGCCGTCTGCACGCCACCGGCGTGCACCGGGCGCAGTCGGGCCAGGACAGTCACCCACGGCCTACCGACGCGGCCGCACTGG                                                                                                                 <  2:788322/150‑1
                                                            GCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACTGTTGCCAGCCGTCTGCACGCCACCGGCGTGCACCGGGCGCAGTCGGGCCAGGACAGCCACCCACGGCCTACCGACGCGGCCGCACTG                                                                                                                  <  1:375859/130‑1
                                                            GCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACTGTTGCCAGCCGTCTGCACGCCACCGGCGTGCACCGGGCGCAGTCGGGCCAGGACAGCCACCCACGGCCTACCGACGCGGCCGCACTG                                                                                                                  >  2:375859/1‑130
                                                                                                                                                        AGGACAGCCACCCACGGCCTACCGACGCGGCCGCACTGGCCCGACTGCGCCCGGTGCACGCCGGTGGCGTGCAGACGGCTGGCAACAGTTGCGCGGTGGTCGATGTCGCGGCGGCAGCCTGGGTCACTCGCGACTCCGGTTGCACTCAcc  >  2:789784/1‑148
                                                                                                                                                                                                                                                                                                              
CGCCAACAGCCGTGGCCATCAGCAAGCGCGCCAAAGGCGGATGAGTGCAATCGGAGTAGCGCGTGACCAAGGCTGCCGCCGCGCCATCGACCACCGCGCAACTGTTGCCAGCCGTCTGCACGCCACCGGCGTGCACCGGGCGCAGTCGGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3793719‑3793872
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagGACAGCCACCCACGGCCTACCGACGCGGCCGCACTGGCCCGACTGCGCCCGGTGCACGCCGGTGGCGTGCAGACGGCTGGCAACAGTTGCGCGGTGGTCGATGGCGCGGCGGCAGCCTTGGTCACGCGCTACTCCGATTGCACTCATC  <  NC_002947/3793905‑3793758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.