New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3795181 | 30 (0.690) | 3 (0.070) | 3/246 | NT | 9.5% | coding (1316/1884 nt) | fcs | feruloyl‑CoA‑synthetase |
? | NC_002947 | = 3795221 | 28 (0.670) | coding (1276/1884 nt) | fcs | feruloyl‑CoA‑synthetase |
GACGAATACCCCGGACGAAAGTTTGAAGTCCTCAGCGATACGGCCATCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3795030‑3795181 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCGCTTCCGTGGCCCGCATATCATGCCGGGCTACTGGCGCTCGCCGCAGCAGACCGCCGAGGCGTTCGACGAGGAGGGCTTCTACTGTTCGGGCGACGCGTTGAAGCTGGCCGATGCCAGGCAGCCCGAGCTTGGCCTGATGTTCGATGG < NC_002947/3795221‑3795073 GACGAATACCCCGGACGAAAGTTTGAAGTCCTCAGCGATACGGCCATCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGG < 1:93302/150‑1 ACGAATACCCCGGACGAAAGTTTGAAGTCCTCAGCGATACGGCCATCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGC > 1:39905/1‑150 ATCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGCGCTTCCGTGGCCCGCATATCATGCCGGGCTACTGGCGCTCGC < 2:1100291/150‑1 TCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGCGCTTCCGTGGCCAGCATATCATGCCGGGCTACTGGCGCTCGCC > 1:1093500/1‑150 AACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCGCGCTTCCGTGGCCCGCATATCATGCCGGGCTACTGGCGCTCGCCGCA < 2:1093500/150‑1 GGCGCGCTTCCGTGGCCCGCATATCATGCCGGGCTACTGGCGCTCGCCGCAGCAGACCGCCGAGGCGTTCGACGAGGAGGGCTTCTACTGTTCGGGCGACGCGTTGAAGCTGGCCGATGCCAGGCAGCCCGAGCTTGGCCTGATGTTCGA < 1:103256/150‑1 GCGCTTCCGTGGCCCGCATATCATGCCGGGCTACTGGCGCTCGCCGCAGCAGACCGCCGAGGCGTTCGACGAGGAGGGCTTCTACTGTTCGGGCGACGCGTTGAAGCTGGCCGATGCCAGGCAGCCCGAGCTTGGCCTGATGTTCGATGG > 1:893451/1‑150 GACGAATACCCCGGACGAAAGTTTGAAGTCCTCAGCGATACGGCCATCGAACATCAGGCCAAGCTCGGGCTGCCTGGCATCGGCCAGCTTCAACGCGTCGCCCGAACAGTAGAAGCCCTCCTCGTCGAACGCCTCGGCGGTCTGCTGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3795030‑3795181 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgCGCTTCCGTGGCCCGCATATCATGCCGGGCTACTGGCGCTCGCCGCAGCAGACCGCCGAGGCGTTCGACGAGGAGGGCTTCTACTGTTCGGGCGACGCGTTGAAGCTGGCCGATGCCAGGCAGCCCGAGCTTGGCCTGATGTTCGATGG < NC_002947/3795221‑3795073 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |