New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3835561	19 (0.440)	3 (0.070)	3/240	NT	12.3%	coding (6/879 nt)	PP_3387	hypothetical protein
	?	NC_002947	= 3835595	25 (0.610)					coding (40/879 nt)	PP_3387	hypothetical protein

AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3835407‑3835561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcccGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA  <  NC_002947/3835595‑3835452                                                                                                                                                                                                                                                                                                             AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGGCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGA                                                                                                                                                       >  2:1066823/1‑150  AAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGAT                                                                                                                                                      >  1:638943/1‑150                                                 ACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAG                                                                                                       <  1:728682/150‑1                                                 ACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAG                                                                                                       >  2:281382/1‑150                                                     CTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTG                                                                                                   <  1:281382/150‑1                                                                                                                                                      ATGCCCGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA  <  1:673342/150‑1                                                                                                                                                                                                                                                                                                             AAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3835407‑3835561 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgcccGCAGCACATCGACCATTGCTCTGACAAATGGGCTGGGCATCAGCTTGCTCCTTCCATGCGAATGATGGTGTGGCCGTCGGCGATCGCCTTGAGCAGGCAGCTGAGGCAAATGGGTTCGCCAGGCGCTGGTACGCCAGACGTTGA  <  NC_002947/3835595‑3835452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.