New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3835561 | 19 (0.440) | 3 (0.070) | 3/240 | NT | 12.3% | coding (6/879 nt) | PP_3387 | hypothetical protein |
? | NC_002947 | = 3835595 | 25 (0.610) | coding (40/879 nt) | PP_3387 | hypothetical protein |
TCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGCAAGCCCAGTTCAGCAACCTGCGGACAGCAGGCC > NC_002947/3835452‑3835742 | tCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCgggcat < 1:673342‑M2/150‑7 (MQ=255) tGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGAGGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCAc < 1:754602/150‑1 (MQ=255) aCCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGc < 2:399493/150‑1 (MQ=255) ccAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGcc > 2:961291/1‑150 (MQ=255) cAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCt > 1:571713/1‑150 (MQ=255) ccATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGa > 1:844055/1‑150 (MQ=255) tttGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAAt < 1:25230/150‑1 (MQ=255) cctgcTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAgc > 2:963615/1‑123 (MQ=255) cctgcTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAgc < 1:963615/123‑1 (MQ=255) gATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCaa < 2:774570/150‑1 (MQ=255) gATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCaa > 1:367556/1‑150 (MQ=255) cGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGaa < 1:76548/150‑1 (MQ=255) gCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCTGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGaac < 2:638943/150‑1 (MQ=255) ccACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATg < 1:1130561/114‑1 (MQ=255) ccACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATg > 2:1130561/1‑114 (MQ=255) ccACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGAcc > 2:443813/1‑150 (MQ=255) acacCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCgg > 1:832041/1‑150 (MQ=255) gAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCgct > 1:918779/1‑150 (MQ=255) cAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCgggcatcagcttgctccttccatgcgaatgatggtgtggccgtcggcgatcgccttgagcaggcagctgaggcaaatgggttcgccaggcgctggtacgccag < 1:281382‑M2/150‑104 (MQ=255) cTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCgggcatcagcttgctccttccatgcgaatgatggtgtggccgtcggcgatcgccttgagcaggcagctgaggcaaatgggttcgccaggcgctggtacgccagacgt < 1:728682‑M2/150‑108 (MQ=255) cTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCgggcatcagcttgctccttccatgcgaatgatggtgtggccgtcggcgatcgccttgagcaggcagctgaggcaaatgggttcgccaggcgctggtacgccagacgt > 2:281382‑M2/1‑43 (MQ=255) cccagcccaTTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTgcag < 2:1013286/150‑1 (MQ=255) tttGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGCAAGCCCAg > 1:837243/1‑150 (MQ=255) gTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGCAAGCCCAGTTc < 1:443813/150‑1 (MQ=255) tCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGCAAGCCCAGTTCa < 1:961291/150‑1 (MQ=255) tCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGCAAGCCCAGTTCa < 1:1066823/150‑1 (MQ=255) agagCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGAAAGCCCAGTTCAGc > 1:559971/1‑150 (MQ=255) gagCAATGGTCGATGTGCTGCGGGCATCCGATCAATATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCAACTGCTGCAGCAAGCCCAGTTCAGcc > 1:364812/1‑149 (MQ=255) aTGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGCAAGCCCAGTTCAGCAACCTg < 2:918779/150‑1 (MQ=255) tgcGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGCAAGCCCAGTTCAGCAACCTGCGGACAGCAGGcc > 2:882257/1‑150 (MQ=255) | TCAACGTCTGGCGTACCAGCGCCTGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAGGCGATCGCCGACGGCCACACCATCATTCGCATGGAAGGAGCAAGCTGATGCCCAGCCCATTTGTCAGAGCAATGGTCGATGTGCTGCGGGCATCCGATCACTATCGCCTCAGCGCCATCGTGGAAATGGCCAATTTGACACCCAAGGTGCAAGAACAACTGACCGGGCACTACACGGGCCGCTGCTGGCCACTGCTGCAGCAAGCCCAGTTCAGCAACCTGCGGACAGCAGGCC > NC_002947/3835452‑3835742 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |