New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3989042	40 (0.920)	4 (0.100)	4/242	NT	9.6%	coding (1516/2085 nt)	oplA	5‑oxoprolinase A
	?	NC_002947	= 3989064	37 (0.900)					coding (1538/2085 nt)	oplA	5‑oxoprolinase A

CGCGGGCGGTGCGGCGGGCATGCACGTGGTGCGCCTGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3988888‑3989042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgccAGGTCGACGTGCCCGGCGTCCAGGCGCATCGACAGGCTGGTGAGCTGGTCGTAGCGCACGTCGGACAGGATCTGGCCGAACGCACACAAGCCCGAGGCCACCTTGGGGATCAGCACGGTGTGCATGCCAATTTCTTCGGCCA  <  NC_002947/3989064‑3988923                                                                                                                                                                                                                                                                                                           CGCGGGCGGTGCGGCGGGCATGCACGTGGTGCGCCTGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGAT                                                                                                                                                     <  2:891030/150‑1   CGGGCGGTGCGGCGGGCATGCACGTGGTGCGCCTGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGC                                                                                                                                                   <  1:95284/150‑1     GGCGGTGCGGCGGGCATGCACGTGGTGCGCCTGGCCGAAGAAGTTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCACTGCGC                                                                                                                                                 <  2:519113/150‑1                                         GAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCAGGTCGACGTGCCCGGCGTCCAGGCGCAT                                                                                                                   >  1:422132/1‑144                                         GAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCAGGTCGACGTGCCCGGCGTCCAGGCGCAT                                                                                                                   <  2:422132/144‑1                                                                                                                GTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCAGGTCGACGTGCCCGGCGTCCA                                                                                                                          >  1:108943/1‑66                                                                                                                GTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCCAGGTCGACGTGCCCGGCGTCCA                                                                                                                          <  2:108943/66‑1                                                                                                                                                          CCAGGTCGACGTGCCCGGCGTCCAGGCGCATCGACAGGCTGGTGAGCTGGTCGTAGCGCACGTCGGACAGGATCTGGCCGAACGCACACAAGCCCGAGGCCACCTTGGGGATCAGCACGGTGTGCATGCCAATTTCTTCGGCCA  >  1:128161/1‑144                                                                                                                                                          CCAGGTCGACGTGCCCGGCGTCCAGGCGCATCGACAGGCTGGTGAGCTGGTCGTAGCGCACGTCGGACAGGATCTGGCCGAACGCACACAAGCCCGAGGCCACCTTGGGGATCAGCACGGTGTGCATGCCAATTTCTTCGGCCA  <  2:128161/144‑1                                                                                                                                                                                                                                                                                                           CGCGGGCGGTGCGGCGGGCATGCACGTGGTGCGCCTGGCCGAAGAAATTGGCATGCACACCGTGCTGATCCCCAAGGTGGCCTCGGGCTTGTGTGCGTTCGGCCAGATCCTGTCCGACGTGCGCTACGACCAGCTCACCAGCCTGTCGATGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3988888‑3989042 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgccAGGTCGACGTGCCCGGCGTCCAGGCGCATCGACAGGCTGGTGAGCTGGTCGTAGCGCACGTCGGACAGGATCTGGCCGAACGCACACAAGCCCGAGGCCACCTTGGGGATCAGCACGGTGTGCATGCCAATTTCTTCGGCCA  <  NC_002947/3989064‑3988923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.