New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4247312 = | 43 (0.990) | 4 (0.100) | 4/246 | NT | 8.4% | coding (649/1608 nt) | aruI | 2‑ketoarginine decarboxylase AruI |
? | NC_002947 | 4247350 = | 46 (1.100) | coding (611/1608 nt) | aruI | 2‑ketoarginine decarboxylase AruI |
CCCTGGACGTGCTGGCGGCATCGGTCAGCCGGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4247464‑4247312 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACGGCGTACCACCTCACCGCTCCAGTCCCGGCTGACCGATGCCGCCAGCACGTCCAGGGGCACCGAAATGTGCACCGGGCGCGGTCGTTC > NC_002947/4247350‑4247495 CCCTGGACGTGCTGGCGGCATCGGTCAGCCGGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTG > 2:371592/1‑150 GCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACGGCGTACCA < 1:1064097/119‑1 GCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACGGCGTACCA > 2:1064097/1‑119 CGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACGGCGTACCACCTCACCGCTCCAGTCCCGGCTGACCGATGCCGCCAGCACGT > 1:288524/1‑147 CGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACGGCGTACCACCTCACCGCTCCAGTCCCGGCTGACCGATGCCGCCAGCACGT < 2:288524/147‑1 GGCGGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACGGCGTACCACCTCACCGCTCCAGTCCCGGCTGACCGATGCCGCCAGCACGTCCAGGGGCACCGAAATGTGCACCGGGCGCGGTCGTTC < 2:826699/150‑1 CCCTGGACGTGCTGGCGGCATCGGTCAGCCGGGACTGGAGCGGTGAGGTGGTACGCCGTCCCGGGCGTGGCCAGCCGTGCCGCGAAACCCTCGAGCAGGCTGCCCTGAAGCTTGCCGCCGCCCAGCGGCCTATGATCATTGCCGGGGGTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4247464‑4247312 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGCAAGCTTCAGGGCAGCCTGCTCGAGGGTTTCGCGGCACGGCTGGCCACGCCCGGGACGGCGTACCACCTCACCGCTCCAGTCCCGGCTGACCGATGCCGCCAGCACGTCCAGGGGCACCGAAATGTGCACCGGGCGCGGTCGTTC > NC_002947/4247350‑4247495 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |