New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4430876	31 (0.720)	4 (0.100)	4/240	NT	11.4%	coding (602/1068 nt)	PP_3925	hypothetical protein
	?	NC_002947	= 4430908	33 (0.810)					coding (634/1068 nt)	PP_3925	hypothetical protein

GGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4430764‑4430876 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcacgaTGCCTGGGCGCGGGTGGTCGGCCGGCATTTTTTCGTGCAGCCAGGCGGTTACCGTTTCCCAGCGTGGCGCATCCGGTGTCAGGGCTTTTTCATAACGGCTGGTCCA  <  NC_002947/4430908‑4430803                                                                                                                                                                                                                             GGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGATGCCTGGGCGCGGGTGGTCGGCCGGCATTTTTTCGTG                                                                       >  1:829738/1‑150  GCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGATGCCTGGGCGCGGGTGGTCGGCCGGCATTTTTTCGTGC                                                                      <  2:829738/150‑1                             AGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGATGCCTGGGCGCGGGTGGTCGGCCGGCATTTTTTCGTGCA                                                                     >  1:418737/1‑124                             AGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGATGCCTGGGCGCGGGTGGTCGGCCGGCATTTTTTCGTGCA                                                                     <  2:418737/124‑1                                                                                                           TGCACGATGCCTGGGCGCGGGTGGTCGGCCGGCATTTTTTCGTGCAGCCAGGCGGTTACCGTTTCCCAGCGTGGCGCATCCGGTGTCAGGGCTTTTTCATAACGGCTGGTCCA  >  1:405655/1‑113                                                                                                           TGCACGATGCCTGGGCGCGGGTGGTCGGCCGGCATTTTTTCGTGCAGCCAGGCGGTTACCGTTTCCCAGCGTGGCGCATCCGGTGTCAGGGCTTTTTCATAACGGCTGGTCCA  <  2:405655/113‑1                                                                                                                                                                                                                             GGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4430764‑4430876 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcacgaTGCCTGGGCGCGGGTGGTCGGCCGGCATTTTTTCGTGCAGCCAGGCGGTTACCGTTTCCCAGCGTGGCGCATCCGGTGTCAGGGCTTTTTCATAACGGCTGGTCCA  <  NC_002947/4430908‑4430803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.