| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4430876 | 31 (0.720) | 4 (0.100) | 4/240 | NT | 11.4% | coding (602/1068 nt) | PP_3925 | hypothetical protein |
| ? | NC_002947 | = 4430908 | 33 (0.810) | coding (634/1068 nt) | PP_3925 | hypothetical protein | |||||
GGTGGACTACACCGCCTGCGGCCTGGCCGACCTGGGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGAC > NC_002947/4430730‑4431021 | ggTGGACTACACCGCCTGCGGCCTGGCCGACCTGGGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGaaaa < 1:1004993/150‑1 (MQ=255)ggTGGACTACACCGCCTGCGGCCTGGCCGACCTGGGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGaaaa < 1:666902/150‑1 (MQ=255) gTGGACTACACCGCCTGCGGCCTGGCCGACCTGGGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACGAGACGGTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGaaaaa > 2:366894/1‑150 (MQ=255) aCTACACCGCCTGCGGCCTGGCCGACCTGGGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATgc < 2:248401/150‑1 (MQ=255) acCGCCTGCGGCCTGGCCGACCTGGGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATgccggcc > 2:529147/1‑150 (MQ=255) acCGCCTGCGGCCTGGCCGACCTGGGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGAATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATgccggcc > 2:755747/1‑150 (MQ=255) gCCGACCTGGGCAAGCCGGAGGGATCAAAAATGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCa > 1:869730/1‑150 (MQ=255) ggCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAtgcctgggcgcgggtggtcggccggcattttttcgtg > 1:829738‑M1/1‑113 (MQ=255) gCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAtgcctgggcgcgggtggtcggccggcattttttcgtgc < 2:829738‑M1/150‑39 (MQ=255) gCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGCAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACaa < 1:529147/150‑1 (MQ=255) cGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACg > 1:896744/1‑150 (MQ=255) cGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGACGCAATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACg > 1:1042134/1‑150 (MQ=255) cTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACAAAGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCg > 2:427437/1‑150 (MQ=255) tACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCgg < 2:409524/150‑1 (MQ=255) gcCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACg > 1:220687/1‑150 (MQ=255) aGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAtgcctgggcgcgggtggtcggccggcattttttcgtgca < 2:418737‑M1/124‑40 (MQ=255) aGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAtgcctgggcgcgggtggtcggccggcattttttcgtgca > 1:418737‑M1/1‑85 (MQ=255) cGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCt < 1:777465/150‑1 (MQ=255) cTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGAcgc < 1:632207/150‑1 (MQ=255) tGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCAtcgtgca < 2:405655‑M2/113‑8 (MQ=255) tGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCAtcgtgca > 1:405655‑M2/1‑106 (MQ=255) gACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGTACGCGGa < 1:427437/150‑1 (MQ=255) cAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAAc < 2:196755/130‑1 (MQ=255) cAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAAc > 1:196755/1‑130 (MQ=255) aGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAAc > 1:778722/1‑150 (MQ=255) gTTATGAAAAAGCCCTGACACAGGATGCGCCACGCTGGGAAACGGTACCAGCCTAGCTGCACGAAAAAATGCCGGCCCATTCAGTTTGTCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTACTCCTGGACGCGGACAACTCCa > 1:346713/1‑150 (MQ=255) tATGAAAAAGCCCTGACACCGGATGCGCCACGCACCGCTAGCGTAGCAACCTCAGTGGACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATg < 1:519917/150‑1 (MQ=255) aaaaGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACTCGGACAACCCCATg < 2:1030845/145‑1 (MQ=255) aaaaGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATg > 1:1030845/1‑145 (MQ=255) aaaaGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGcat < 1:760855/150‑1 (MQ=255) gCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCatcatc < 2:896744/150‑1 (MQ=255) cccTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCAACGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCg > 1:78680/1‑150 (MQ=255) cTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGgt < 2:914951/150‑1 (MQ=255) tGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTAACGGGGCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGgtg > 1:345695/1‑150 (MQ=255) cacCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCACCTGCGCATCATCGGTGTGc < 1:366894/150‑1 (MQ=255) gcgcCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTgg < 2:78680/150‑1 (MQ=255) aCGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAAt < 1:755747/150‑1 (MQ=255) aaaCGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCAccc < 1:1083767/150‑1 (MQ=255) gCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCAt < 2:220687/150‑1 (MQ=255) gCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCAt > 2:588843/1‑150 (MQ=255) tGCACGAtgcctgggcgcgggtggtcggccggcattttttcgtgcagccaggcggttaccgtttcccagcgtggcgcatccggtgtcagggctttttcataacggctggtcca > 1:405655‑M1/1‑7 (MQ=255) tGCACGAtgcctgggcgcgggtggtcggccggcattttttcgtgcagccaggcggttaccgtttcccagcgtggcgcatccggtgtcagggctttttcataacggctggtcca < 2:405655‑M1/113‑107 (MQ=255) tGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCAtcgtgcagccaggcggttaccgtttcccagcgtggcgcatccggtgtcagggctttttcataacggctggtccagccctcgatct < 2:418737‑M2/124‑86 (MQ=255) tGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCAtcgtgcagccaggcggttaccgtttcccagcgtggcgcatccggtgtcagggctttttcataacggctggtccagccctcgatct > 1:418737‑M2/1‑39 (MQ=255) gCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCAtcgtgcagccaggcggttaccgtttcccagcgtggcgcatccggtgtcagggctttttcataacggctggtccagccctcgatctggcgctgcacgtagccctccggcttgc < 2:829738‑M2/150‑113 (MQ=255) cACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCAtcgtgcagccaggcggttaccgtttcccagcgtggcgcatccggtgtcagggctttttcataacggctggtccagccctcgatctggcgctgcacgtagccctccggcttgcc > 1:829738‑M2/1‑37 (MQ=255) gAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGgt < 2:435254/102‑1 (MQ=255) gAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGgt > 1:435254/1‑102 (MQ=255) | GGTGGACTACACCGCCTGCGGCCTGGCCGACCTGGGCAAGCCGGAGGGCTACGTGCAGCGCCAGATCGAGGGCTGGACCAGCCGTTATGAAAAAGCCCTGACACCGGATGCGCCACGCTGGGAAACGGTAACCGCCTGGCTGCACGAAAAAATGCCGGCCGACCACCCGCGCCCAGGCATCGTGCACAACGACTACCGGTTCGACAACGTCATCCTGGACGCGGACAACCCCATGCGCATCATCGGTGTGCTGGACTGGGAAATGGCCACCCTGGGCGACCCACTCATGGAC > NC_002947/4430730‑4431021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |