New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4599018 =	47 (1.080)	7 (0.170)	6/244	NT	12.8%	coding (837/3627 nt)	PP_4071	membrane protein
	?	NC_002947	4599066 =	50 (1.200)					coding (789/3627 nt)	PP_4071	membrane protein

GATTGGCTGCAGCGCAATCGAAGCCAGAGAGCCCTCAACGGCCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4599170‑4599018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACC  >  NC_002947/4599066‑4599213                                                                                                                                                                                                                                                                                                               GATTGGCTGCAGCGCAATCGAAGCCAGAGAGCCCTCAACGGCCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTG                                                                                                                                                         >  2:687617/1‑150  ATTGGCTGCAGCGCAATCGAAGCCAGAGAGCCCTCAACGGCCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGG                                                                                                                                                        >  2:979778/1‑150                                          CCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTT                                                                                                                                                          >  1:344342/1‑108                                          CCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTT                                                                                                                                                          <  2:344342/108‑1                                                                                            AACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGA                                                              >  2:880486/1‑150                                                                                                      CCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCA                                                    >  2:310845/1‑150                                                                                                       CTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTC                                                                >  1:537994/1‑137                                                                                                       CTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTC                                                                <  2:537994/137‑1                                                                                                                   CTGCGCACACGTCTTTACGAGGTGAGCAG‑CAGGTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGA                                      >  1:521789/1‑150                                                                                                                         ACACGTCTTTACGAGGTGAGCAG‑CAGGTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGC                                <  2:521789/150‑1                                                                                                                                    CGAGGTGAGCAGCCAGTTGGGCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGCCACAGTTTGc                      <  1:880486/150‑2                                                                                                                                                        GCAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACC  >  1:702358/1‑150                                                                                                                                                                                                                                                                                                               GATTGGCTGCAGCGCAATCGAAGCCAGAGAGCCCTCAACGGCCTGGTGCTGGTTGTCGACCTGCCTGCGCTACTGCACGGTACCGTCGAGCAACGCACGGCCCTTGCCCACCTGCTGCGCACACGTCTTTACGAGGTGAGCAGCCAGTTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4599170‑4599018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggcAAGGGCCGTGCGTTGCTCGACGGTACCGTGCAGTAGCGCAGGCAGGTCGACAACCAGCACCAGGCCGTTGAGGGCTCTCTGGCTTCGATTGCGCTGCAGCCAATCCAACAGATGCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACC  >  NC_002947/4599066‑4599213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.