New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4599330	32 (0.740)	5 (0.120)	5/240	NT	13.5%	coding (525/3627 nt)	PP_4071	membrane protein
	?	NC_002947	= 4599354	34 (0.830)					coding (501/3627 nt)	PP_4071	membrane protein

GCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACCGAAGACTCAACGTCAGTGGAGTCACTGCCCAGCGAATCTGCGGGGCCGTTCTGGCTGATAAAGGCACCGGGCGGGTCGATGATCACCGCATCATTGCTGATCCACCACCCCACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4599179‑4599330 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggggCCGGCCAGCGCAGGCGCTCGCCTACCCCGTGGGGTGGTGGATCAGCAATGATGCGGTGATCATCGACCCGCCCGGTGCCTTTATCAGCCAGAACGGCCCCGCAGATTCGCTGGGCAGTGACTCCACTGACGTTGAGTCTTCG  <  NC_002947/4599354‑4599213                                                                                                                                                                                                                                                                                                        GCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACCGAAGACTCAACGTCAGTGGAGTCACTGCCCAGCGAATCTGCGGGGCAGTTCTGGCTGATAAAGGCACCGGGCGGGTCGATGATCACCGCATCATTGCTGATCCACCACCCCACGG                                                                                                                                                  <  2:639554/150‑1  CTGCCACAGTTTGGCTTGGGTTCCAGACGGTACCGAAGACTCAACGTCAGTGGAGTCACTGCGCAGCGAAGCTGCGGGGCCGTTCTGGCTGATAAAGGCACCGGGCGGGGCGATGATCACCGCATCATTGCTGATCCACCACCCCACGGG                                                                                                                                                 >  2:225288/1‑150                                                                                           TGATAAAGGCACCGGGCGGGTCGATGATCACCGCATCATTGCTGATCCACCACCCCACGGGGCCGGCCAGCGCAGGCGCTCGCCTACCCCGTG                                                                                                                 >  1:1035471/1‑93                                                                                           TGATAAAGGCACCGGGCGGGTCGATGATCACCGCATCATTGCTGATCCACCACCCCACGGGGCCGGCCAGCGCAGGCGCTCGCCTACCCCGTG                                                                                                                 <  2:1035471/93‑1                                                                                                                                          CACCACCCCACGGGGTAGGCGAGCGCCTGCGCTGGCCTACCCCGTGGGGTGGTGGATCAGCAATGATGCGGTGATCATGGACCCGCCCGGTGCCTTTATCAGCCAGAACGGCCCCGCAGATTCGCTGGGCAGTGACTCCACTGACGTTGg         >  2:369227/1‑149                                                                                                                                           ACCACCCCACGGGGTAGGCGAGCGCCTGCGCTGGCCGGCCCCGTGGGGTGGTGGATCAGCAATGATGCGGTGATCATCGACCCGCCCGGTGCCTTTATCAGCCAGAACGGCCCCGCAGATTCGC                                  >  1:779159/1‑124                                                                                                                                           ACCACCCCACGGGGTAGGCGAGCGCCTGCGCTGGCCGGCCCCGTGGGGTGGTGGATCAGCAATGATGCGGTGATCATCGACCCGCCCGGTGCCTTTATCAGCCAGAACGGCCCCGCAGATTCGC                                  <  2:779159/124‑1                                                                                                                                                 tccCGGCGCCGGCCAGCGCAGGCGCTCGCCTACCCCGTGGGGTGGTGGATCAGCAATGATGCGGTGATCATCGACCCGCCCGGTGCCTTTATCAGCCAGAACGGCCCCGCAGATTCGCTGGGCAGTGACTCCACTGACGTTGAGTCTTCG  <  1:839519/147‑1                                                                                                                                                                                                                                                                                                        GCTGCCACAGTTTGGCTTGGGTTCCAGACGGTACCGAAGACTCAACGTCAGTGGAGTCACTGCCCAGCGAATCTGCGGGGCCGTTCTGGCTGATAAAGGCACCGGGCGGGTCGATGATCACCGCATCATTGCTGATCCACCACCCCACGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4599179‑4599330 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggggCCGGCCAGCGCAGGCGCTCGCCTACCCCGTGGGGTGGTGGATCAGCAATGATGCGGTGATCATCGACCCGCCCGGTGCCTTTATCAGCCAGAACGGCCCCGCAGATTCGCTGGGCAGTGACTCCACTGACGTTGAGTCTTCG  <  NC_002947/4599354‑4599213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.