| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4793233 = | 48 (1.110) | 3 (0.070) | 3/244 | NT | 6.5% | coding (652/6525 nt) | pvdI | non‑ribosomal peptide synthetase |
| ? | NC_002947 | 4793269 = | 40 (0.960) | coding (616/6525 nt) | pvdI | non‑ribosomal peptide synthetase | |||||
TTGCTGCGCACCTCGGCCACCGAGCACCTGTTGCTGATCACTCTGCACCATATCATCGCCGACGGCTGGTCGCTGGGTATCCTGATCGACGAACTGGTTCGGCTTTACGATGCCGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4793386‑4793233‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGC > NC_002947/4793269‑4793371 TTGCTGCGCACCTCGGCCACCGAGCACCTGTTGCTGATCACTCTGCACCATATCATCGCCGACGGCTGGTCGCTGGGTATCCTGATCGACGAACTGGTTCGGCTTTACGATGCCGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTG > 1:173263/1‑150TTGCTGCGCACCTCGGCCACCGAGCACCTGTTGCTGATCACTCTGCACCATATCATCGCCGACGGCTGGTCGCTGGGTATCCTGATCGACGAACTGGTTCGGCTTTACGATGCCGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTG < 2:476752/150‑1 TGCGCACCTCGGCCACCGAGCACCTGTTGCTGATCACTCTGCACCATATCATCGCCGACGGCTGGTCGCTGGGTATCCTGATCGACGAACTGGTTCGGCTTTACGATGCCGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCA > 1:528929/1‑150 GGCTTTACGATGCCGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCT > 1:971720/1‑150 CTTTACGATGCCGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCG < 2:971720/150‑1 CGATGCCGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGC > 2:272506/1‑150 TTGCTGCGCACCTCGGCCACCGAGCACCTGTTGCTGATCACTCTGCACCATATCATCGCCGACGGCTGGTCGCTGGGTATCCTGATCGACGAACTGGTTCGGCTTTACGATGCCGCCGTGGCCGGCCAGGCGTCAGCACTTGCGCCGCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4793386‑4793233‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGC > NC_002947/4793269‑4793371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |