New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4793233 =	48 (1.110)	3 (0.070)	3/244	NT	6.5%	coding (652/6525 nt)	pvdI	non‑ribosomal peptide synthetase
	?	NC_002947	4793269 =	40 (0.960)					coding (616/6525 nt)	pvdI	non‑ribosomal peptide synthetase

AACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCATCAGCGGCCCGGCG  >  NC_002947/4793124‑4793411                                                                                                                                                  |                                                                                                                                               aaCACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCAcggcg                                                                                                                                            <  1:585811/150‑1 (MQ=255)  acacGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCAcggcgg                                                                                                                                           <  2:173913/150‑1 (MQ=255)     cGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCAt                                                                                                                                        <  1:423143/150‑1 (MQ=255)       gccaccgagcacctgttgctgatcactctgcaccatatcatcgccgacggctggtcgctgggtatcctgatcgacgaactggttcggctttacgatgccgccgTGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCg                                                                                                                                      >  2:272506‑M1/104‑150 (MQ=255)           ggtCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTaaa                                                                                                                                  <  1:189431/150‑1 (MQ=255)            gtCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAg                                                                                                                                 >  2:723857/1‑150 (MQ=255)            cgagcacctgttgctgatcactctgcaccatatcatcgccgacggctggtcgctgggtatcctgatcgacgaactggttcggctttacgatgccgccgTGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAg                                                                                                                                 <  2:971720‑M1/52‑1 (MQ=255)              agcacctgttgctgatcactctgcaccatatcatcgccgacggctggtcgctgggtatcctgatcgacgaactggttcggctttacgatgccgccgTGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGcc                                                                                                                               >  1:971720‑M1/97‑150 (MQ=255)                  gCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACCGGGCGAAATCGCCATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAAc                                                                                                                           <  2:479084/150‑1 (MQ=255)                  gCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAAc                                                                                                                           <  2:253560/150‑1 (MQ=255)                        atgatCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTtc                                                                                                                     >  2:754946/1‑150 (MQ=255)                           atCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTtcgtc                                                                                                                  <  2:913870/150‑1 (MQ=255)                                          cAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAg                                                                                                   >  2:547628/1‑150 (MQ=255)                                           aGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATc                                                                                                              <  2:961882/138‑1 (MQ=255)                                           aGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATc                                                                                                              >  1:961882/1‑138 (MQ=255)                                           aGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGc                                                                                                  <  1:705947/150‑1 (MQ=255)                                                    gcCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCg                                                                                         >  2:808194/1‑150 (MQ=255)                                                    gcCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCg                                                                                         >  2:808190/1‑150 (MQ=255)                                                           cGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCga                                                                                  <  2:173261/150‑1 (MQ=255)                                                            gCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCgat                                                                                 <  1:401586/150‑1 (MQ=255)                                                             ccGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCgatg                                                                                >  2:1057768/1‑150 (MQ=255)                                                                  ttCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCAAGGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACACAGCGACCAGCCGTCGGCGATGATATg                                                                           >  1:20109/1‑150 (MQ=255)                                                                    ccagccagCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCg                                                                                   <  1:735874/140‑1 (MQ=255)                                                                    ccagccagCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCg                                                                                   >  2:735874/1‑140 (MQ=255)                                                                    ccagccagCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGt                                                                         <  1:856028/150‑1 (MQ=255)                                                                      agccagcTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGc                                                                       >  1:809670/1‑150 (MQ=255)                                                                               cgctgcCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATc                                                              <  1:754946/150‑1 (MQ=255)                                                                                gctgcCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGACGACGGCGATGATATGGTGCAGAGTGATCa                                                             >  1:503005/1‑150 (MQ=255)                                                                                 ctgcCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAg                                                            <  1:723857/150‑1 (MQ=255)                                                                                        aGGGCGAAATCGCGATACTGGATGGCCAGCAGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAgg                                                     >  2:655177/1‑150 (MQ=255)                                                                                            ggctttacgatgccgccgtggccggccaggcgtcagcacttgcgccgctggccaCGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCt                                                 >  1:971720‑M2/55‑150 (MQ=255)                                                                                              ctttacgatgccgccgtggccggccaggcgtcagcacttgcgccgctggccaCGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCg                                               <  2:971720‑M2/98‑1 (MQ=255)                                                                                                aTCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCaga                                                                    >  2:281419/1‑127 (MQ=255)                                                                                                aTCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCaga                                                                    <  1:281419/127‑1 (MQ=255)                                                                                                 tCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTg                                            <  1:1057768/150‑1 (MQ=255)                                                                                                   cgatgccgccgtggccggccaggcgtcagcacttgcgccgctggccaCGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGc                                          >  2:272506‑M2/48‑150 (MQ=255)                                                                                                       tACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAg                                      <  2:809670/150‑1 (MQ=255)                                                                                                             aTGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTgcgc                                <  1:547628/150‑1 (MQ=255)                                                                                                              TGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCgca                               >  1:528929‑M1/1‑150 (MQ=255)                                                                                                                  CAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCaa                           <  2:476752‑M1/150‑1 (MQ=255)                                                                                                                  CAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCaa                           >  1:173263‑M1/1‑150 (MQ=255)                                                                                                                              tGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAgcg                        >  2:245829/1‑141 (MQ=255)                                                                                                                              tGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAgcg                        <  1:245829/141‑1 (MQ=255)                                                                                                                              tGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCAt               >  1:222901/1‑150 (MQ=255)                                                                                                                                cTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGt                                                    <  1:100243/111‑1 (MQ=255)                                                                                                                                cTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGt                                                    <  1:102011/111‑1 (MQ=255)                                                                                                                                cTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGt                                                    >  2:100243/1‑111 (MQ=255)                                                                                                                                cTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGt                                                    >  2:102011/1‑111 (MQ=255)                                                                                                                                 tGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGc                 >  1:226868/1‑145 (MQ=255)                                                                                                                                 tGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGc                 <  2:226868/145‑1 (MQ=255)                                                                                                                                           ccggccACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCATCAGCGGCCcggcg  <  1:121898/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                               AACACGGGGTGGTCGTTGCCCAGATGATCCAACCAGTACTCCAGCTGGCGCGCCTGCTCGCCGGCTTCCAGCCAGCTGCGCTGCCACAGGGCGAAATCGCGATACTGGATGGCCAGCGGCGCAAGTGCTGACGCCTGGCCGGCCACGGCGGCATCGTAAAGCCGAACCAGTTCGTCGATCAGGATACCCAGCGACCAGCCGTCGGCGATGATATGGTGCAGAGTGATCAGCAACAGGTGCTCGGTGGCCGAGGTGCGCAGCAAGCGCACCCGCATCAGCGGCCCGGCG  >  NC_002947/4793124‑4793411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.