| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4848823 | 52 (1.200) | 6 (0.140) | 6/244 | NT | 10.7% | coding (78/1383 nt) | hemN | oxygen‑independent coproporphyrinogen III dehydrogenase |
| ? | NC_002947 | = 4848848 | 50 (1.200) | coding (103/1383 nt) | hemN | oxygen‑independent coproporphyrinogen III dehydrogenase | |||||
TACAAATCAACACAGTTTCCTACAGACGGCCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTA‑CCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4848673‑4848823‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑cccaCCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTATGGC < NC_002947/4848848‑4848701 TACAAATCAACACAGTTTCCTACAGACGGCCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTA‑CCC > 2:320802/1‑150 TTTCCTACAGACGGCCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCCACCTCGCTGTGCAG > 1:994634/1‑150 TAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTACCCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGT < 2:994634/150‑1 ACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTA‑CCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGA > 2:136881/1‑150 CTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTA‑CCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAG < 1:136881/150‑1 TTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTA‑CCCACCTCGCTGTGCAGTTGCACGGCGGTTGG > 1:490981/1‑124 TTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTA‑CCCACCTCGCTGTGCAGTTGCACGGCGGTTGG < 2:490981/124‑1 CCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTATG < 2:276946/150‑1 CCCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTATG < 2:706225/150‑1 CCACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGAGAGGTCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGCAAGAGCAGCAGTGCACCGGAGTCTATGG > 1:198440/1‑150 CACCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTATGGC < 1:85943/150‑1 TACAAATCAACACAGTTTCCTACAGACGGCCATAGACTCCGGTGCACTGCTGCTCTTTCCGGGGACTACCCTCATGCTCGACGACCTCCGTTGGGATACCGACCTGATCCGCCGCTACGATCTCGCCGGGCCACGCTACACCTCTTA‑CCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4848673‑4848823‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑cccaCCTCGCTGTGCAGTTGCACGGCGGTTGGGTAAGAGGTGTAGCGTGGCCCGGCGAGATCGTAGCGGCGGATCAGGTCGGTATCCCAACGGAGGTCGTCGAGCATGAGGGTAGTCCCCGGAAAGAGCAGCAGTGCACCGGAGTCTATGGC < NC_002947/4848848‑4848701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |