New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5120200	48 (1.110)	4 (0.100)	4/244	NT	8.0%	coding (104/558 nt)	PP_4506	nitroreductase family protein
	?	NC_002947	= 5120242	46 (1.110)					coding (62/558 nt)	PP_4506	nitroreductase family protein

CGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGCCTGGCTGGCATCGCCCTTGTGCTGCACGGCTTCGGCGAACAGCTCACCCAGCTTCTCGCGGCCCTGGCCTTCGATGGTAAGAAAACGCCACGGCCGCAGCTGGCCGTGATCCGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5120047‑5120200 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCCAATGCCGCCCAGCGCGAGGCGCTGTTCCAGGCTGCCCTGCGCGCCCCGGATCACGGCCAGCTGCGGCCGTGGCGTTTTCTTACCATCGAAGGCCAGGGCCGCGAGAAGCTGGGTGAGCTGTTCGCCGAAGCCGTGCAGCACAA  <  NC_002947/5120242‑5120098                                                                                                                                                                                                                                                                                                             CGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGCCTGGCTGGCATCGCCCTTGTGCTGCACGGCTTCGGCGAACAGCTCACCCAGCTTCTCGCGGCCCTGGCCTTCGATGGTAAGAAAACGCCACGGCCGCAGCTGGCCGTGATCCGGG                                                                                                                                                       <  1:594939/150‑1                                                GCCCTTGTGCTGCACGGCTTCGGCGAACAGCTCACCCAGCTTCTCGCGGCCCTGGCCTTCGATGGTAAGAAAACGCCACGGCCGCAGCCGGCCGTGATCCGGGGCGCCCAATGCCGCCCAGCGCGAGGCGCTGTTCCAGGCTGCCCTGCG                                                                                                        <  1:764691/150‑1                                                      GTGCTCCACTGCGTCGGCGAACAGCTCACCCAGCTTCTCGCGGCCCTGGCCTTCGATGGTAAGAAAACGCCACGGCCGCAGCTGGCCGTGATCCGGGGCGCCCAATGCCGCCCAGCGCGAGGCGCTGTTCCAGGCTGCCCTGCGCGCCCC                                                                                                  <  2:79162/150‑1                                                                                 ACCCAGCTTCTCGCGGCCCTGGCCTTCGATGGTAAGAAAACGCCACGGCCGCAGCTGGCCGTGATCCGGGGCGCCCAATGCCGCCCAGCGCGAGGCGCTGTTCCAGGCTGCCCTGC                                                                                                         >  1:894214/1‑116                                                                                 ACCCAGCTTCTCGCGGCCCTGGCCTTCGATGGTAAGAAAACGCCACGGCCGCAGCTGGCCGTGATCCGGGGCGCCCAATGCCGCCCAGCGCGAGGCGCTGTTCCAGGCTGCCCTGC                                                                                                         <  2:894214/116‑1                                                                                                                                                      GGCGCCCAATGCCGCCCAGCGCGAGGCGCTGTTCCAGGCTGCCCTGCGCGCCCCGGATCACGGCCAGCTGCGGCCGTGGCGTTTTCTTACCATCGAAGGCCAGGGCCGCGAGAAGCTGGGTGAGCTGTTCGCCGAAGCCGTGCAGCACAA  <  2:1105481/150‑1                                                                                                                                                                                                                                                                                                             CGCAGCGGCATCGCACGGGCCTTGTCCAGTGCAGCCTGGCTGGCATCGCCCTTGTGCTGCACGGCTTCGGCGAACAGCTCACCCAGCTTCTCGCGGCCCTGGCCTTCGATGGTAAGAAAACGCCACGGCCGCAGCTGGCCGTGATCCGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5120047‑5120200 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCCAATGCCGCCCAGCGCGAGGCGCTGTTCCAGGCTGCCCTGCGCGCCCCGGATCACGGCCAGCTGCGGCCGTGGCGTTTTCTTACCATCGAAGGCCAGGGCCGCGAGAAGCTGGGTGAGCTGTTCGCCGAAGCCGTGCAGCACAA  <  NC_002947/5120242‑5120098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.