New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5153642 | 37 (0.850) | 4 (0.100) | 3/242 | NT | 10.1% | coding (619/876 nt) | PP_4537 | membrane protein |
? | NC_002947 | = 5153669 | 36 (0.870) | coding (592/876 nt) | PP_4537 | membrane protein |
CCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5153523‑5153642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcacTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG < NC_002947/5153669‑5153525 CCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTG > 2:801817/1‑150 ACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGT < 1:801817/150‑1 CGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGT < 1:380072/124‑1 CGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGT > 2:380072/1‑124 caAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGT > 2:406560/3‑94 AGCACTTGCCGAGCACTGACGTGCAATGGGTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG < 2:140200/150‑1 AGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG > 1:1121432/1‑150 AGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG < 1:650919/150‑1 AGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG < 1:87536/150‑1 AGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG < 1:909824/150‑1 AGCACTTGCCGAGCACTGACGTGCAATGGCGGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG < 2:361439/150‑1 CCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5153523‑5153642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcacTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG < NC_002947/5153669‑5153525 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |