New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5153642	37 (0.850)	4 (0.100)	3/242	NT	10.1%	coding (619/876 nt)	PP_4537	membrane protein
	?	NC_002947	= 5153669	36 (0.870)					coding (592/876 nt)	PP_4537	membrane protein

CCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACAGCACCTGGCCGGCAGCGTAG  >  NC_002947/5153525‑5153814                                                                                                                                                 |                                                                                                                                                  ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCCGCCATTGCACGTCAGTGCTCGGCAAgtgct                                                                                                                                              <  2:361439‑M2/150‑6 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgct                                                                                                                                              >  1:1121432‑M2/1‑145 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgct                                                                                                                                              <  1:909824‑M2/150‑6 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgct                                                                                                                                              <  1:87536‑M2/150‑6 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgct                                                                                                                                              <  1:650919‑M2/150‑6 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCACCCATTGCACGTCAGTGCTCGGCAAgtgct                                                                                                                                              <  2:140200‑M2/150‑6 (MQ=255)       gCACATGCAGGTTGTACATCAGCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTAt                                                                                                                                        >  2:501239/1‑150 (MQ=255)         acaTGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTg                                                                                                                                      >  2:227245/1‑150 (MQ=255)          aaagCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGc                                                                                                                                     <  2:305235/147‑1 (MQ=255)           aTGCAGGTTGTTCATCCCCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGcc                                                                                                                                    <  1:55607/150‑1 (MQ=255)           aTGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGcc                                                                                                                                    <  1:140200/150‑1 (MQ=255)              cAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGaa                                                                                                                                 <  1:361439/150‑1 (MQ=255)              cAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAACCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGaa                                                                                                                                 <  1:929446/150‑1 (MQ=255)                      tcatcaCCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGa                                                                                                                         >  1:908817/1‑150 (MQ=255)                            ccGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCg                                                                                                                   <  1:616609/150‑1 (MQ=255)                              gCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGAAATTGCCGAACAGCAGGAAGGCCGgc                                                                                                                 >  1:501763/1‑150 (MQ=255)                               ccAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCgttt                                                                                                                <  1:214493/150‑4 (MQ=255)                                         gCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAg                                                                                                      >  1:145528/1‑150 (MQ=255)                                         gCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAg                                                                                                      <  1:227245/150‑1 (MQ=255)                                                        tGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTa                                                                                       <  2:85505/150‑1 (MQ=255)                                                           aCCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgcttg                                                                                                                                            >  2:406560‑M2/1‑87 (MQ=255)                                                           aCCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg                                                                                                                                            >  1:406560/1‑94 (MQ=255)                                                               ttGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTaa                                                                                <  2:145528/150‑1 (MQ=255)                                                                      accaGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGc                                                                         >  1:671378/1‑150 (MQ=255)                                                                      accaGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGc                                                                         >  1:414782/1‑150 (MQ=255)                                                                        caGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCgg                                                                       <  2:501763/150‑1 (MQ=255)                                                                                 cccAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAgg                                                                                                                      <  1:1100222/94‑1 (MQ=255)                                                                                 cccAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAgg                                                                                                                      >  2:1100222/1‑94 (MQ=255)                                                                                 cccAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCTGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAgtgt                                                              <  2:650919/150‑1 (MQ=255)                                                                                       gcCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAgg                                                        >  1:384210/1‑150 (MQ=255)                                                                                               acacAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAgtgt                                                              <  1:122751/136‑1 (MQ=255)                                                                                               acacAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAgtgt                                                              >  2:122751/1‑136 (MQ=255)                                                                                                    gCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgc                                           <  1:987279/150‑1 (MQ=255)                                                                                                     ccccAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcg                                          >  2:610959/1‑150 (MQ=255)                                                                                                      cccNGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcga                                         >  2:702605/1‑150 (MQ=255)                                                                                                            aacaacAGCACAAGACATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGGGCGAcc                                   >  2:68725/1‑150 (MQ=255)                                                                                                             acaacaGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcgagc                                       <  1:790815/145‑1 (MQ=255)                                                                                                             acaacaGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcgagc                                       >  2:790815/1‑145 (MQ=255)                                                                                                                acaGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggt                               <  1:801817‑M2/150‑117 (MQ=255)                                                                                                                acaGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcg                                                         <  1:380072‑M2/124‑91 (MQ=255)                                                                                                                acaGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcg                                                         >  2:380072‑M2/1‑34 (MQ=255)                                                                                                                    cACCAGCCATTGCACGTCAGTGCTCGGCAAgtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggtgggg                           >  2:801817‑M2/1‑30 (MQ=255)                                                                                                                        aGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTCGCGAGCGACCaa                                 >  2:458132/1‑140 (MQ=255)                                                                                                                        aGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTCGCGAGCGACCaa                                 <  1:458132/140‑1 (MQ=255)                                                                                                                         gCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACa                      >  1:669747/1‑150 (MQ=255)                                                                                                                                cACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACAGCACCTg               <  1:975075/150‑1 (MQ=255)                                                                                                                                   gTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgc                                           <  1:1130835/119‑1 (MQ=255)                                                                                                                                   gTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgc                                           >  2:1130835/1‑119 (MQ=255)                                                                                                                                   gTCAGTGCTCGGCAAGTGCTGGGTATTCGCGAACAACAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGACGCTGGGGTGGCGAGCGACCAAGTGACGGCACAGCACCTGGcc            >  1:532966/1‑150 (MQ=255)                                                                                                                                             ggCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACAGCACCTGGCCGGCAGCGTAg  >  1:873091/1‑150 (MQ=255)                                                                                                                                                 |                                                                                                                                                  CCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACGGTACAGCACCTGGCCGGCAGCGTAG  >  NC_002947/5153525‑5153814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.