| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5162643 | 28 (0.650) | 7 (0.200) | 7/202 | NT | 19.1% | intergenic (+118/+83) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase |
| ? | NC_002947 | = 5162675 | 37 (1.080) | intergenic (+150/+51) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase | |||||
GCAATGCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5162476‑5162643‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcttgcccgctcccacagGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGT < NC_002947/5162675‑5162531 GCAATGCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGG < 2:131258/150‑1 AATGCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGC > 2:426875/1‑150 ACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCG > 2:1011738/1‑150 CGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCAAGCCCGCgaa < 1:426875/150‑4 AGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGC > 2:762517/1‑132 AGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGC < 1:762517/132‑1 CAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCACCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTC > 2:930844/1‑150 AAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGA > 2:1109591/1‑150 ACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTG < 1:1011738/150‑1 CCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCACCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGG < 1:930844/150‑1 CTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGA < 1:1109591/150‑1 CTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTC < 2:988822/99‑1 CTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTC > 1:988822/1‑99 TTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCaa > 1:820530/1‑85 TTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCaa < 2:820530/87‑3 TTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGG > 1:871676/1‑145 TTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGG < 2:871676/145‑1 AAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGG < 2:590194/68‑1 AAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGG > 1:590194/1‑68 GGCTTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTG > 2:104143/1‑150 TTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCAGCGTTTCCCGCTTCAGGTGAAG > 2:404397/1‑150 TGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGC < 1:837289/150‑1 GCTCCCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGC > 1:1064752/1‑150 CCACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGG > 2:167295/1‑150 CACAGGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGT > 1:104272/1‑150 GCAATGCTGACGTCGACACCCTGCAGGTAGACCTGGAAGCCAAGTTCTAAGCAACACCCTGCTCTGCTTCACCTGAAGCGGGAAACGCCGACCCCATCCGGCGTTTCCCGCTTCTTTTTGTCTGTGTGAAATGCGCCGGCCCCTTCGCGGGCTTGCCCGCTCCCACAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5162476‑5162643‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcgggcttgcccgctcccacagGTACAGCACAGTTCTCAAGGTCTGTGGTGATACTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGT < NC_002947/5162675‑5162531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |