New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5190394 | 26 (0.600) | 3 (0.080) | 3/234 | NT | 11.1% | intergenic (‑81/+93) | PP_4570/cysK | hypothetical protein/cysteine synthase A |
? | NC_002947 | = 5190411 | 24 (0.600) | intergenic (‑98/+76) | PP_4570/cysK | hypothetical protein/cysteine synthase A |
CGCGCAAGTGCACGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5190238‑5190394 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatcccgccCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGATGATTTTCTGGAGAGCAGGCAGCGCAGCCGTGACTCTTCCTCAAGGAGTGAAAGCATGACCTTTTCCTTTGCAGCCAAGGCGGGTGTCTTGCTGGTGTTTTTCGG < NC_002947/5190411‑5190264 CGCGCAAGTGCACGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGA > 1:166232/1‑150 CCTTGGCTGCAAAGGAAAAGGTCATGCTTTCGCGCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGGTGAGCGGAAAATCATCCTGCCATCATAAACCGATCCCGCCCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGAT < 1:192311/150‑1 GCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGA < 1:775168/124‑1 GCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCCCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGA > 2:775168/1‑124 CCCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGATGATTTTCTGGAGAGCAGGCAGCGCAGCCGTGACTCTTCCTCAAGGAGTGAAAGCATGACCTTTTCCTTTGCAGCCAAGGCGGGTGTCTTGCTGGTGTTTTTCGG < 1:970417/150‑1 CGCGCAAGTGCACGAACAGCACGCTGCCGAAAAACACCAGCAAGACACCCGCCTTGGCTGCAAAGGAAAAGGTCATGCTTTCACTCCTTGAGGAAGAGTCACGGCTGCGCTGCCTGCTCTCCAGAAAATCATCCTGCCATCATAAACCGATCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5190238‑5190394 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatcccgccCGGGTTGTTTTTACCGCGGCGGGATCGGTTTATGATGGCAGGATGATTTTCTGGAGAGCAGGCAGCGCAGCCGTGACTCTTCCTCAAGGAGTGAAAGCATGACCTTTTCCTTTGCAGCCAAGGCGGGTGTCTTGCTGGTGTTTTTCGG < NC_002947/5190411‑5190264 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |