| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5321962 | 42 (0.970) | 3 (0.070) | 3/236 | NT | 6.5% | coding (1338/2322 nt) | mrcB | transglycosylase/transpeptidase |
| ? | NC_002947 | = 5322044 | 47 (1.170) | coding (1256/2322 nt) | mrcB | transglycosylase/transpeptidase | |||||
TTGCTCGGCTGCTCCAGCGCAGTCAGGTATACCGACGGCTTGACCAACGAGCCGATCGGCCGCACAGCATCGATGGCCCGGTTGAAGCCGGCGAAGCCTGCCTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5321855‑5321962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcggGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATCGATGCTGTGCGGCCGATCGGCTCGTTGGTC < NC_002947/5322044‑5321896 TTGCTCGGCTGCTCCAGCGCAGTCAGGTATACCGACGGCTTGACCAACGAGCCGATCGGCCGCACAGCATCGATGGCCCGGTTGAAGCCGGCGAAGCCTGCCT > 1:367409/1‑103TTGCTCGGCTGCTCCAGCGCAGTCAGGTATACCGACGGCTTGACCAACGAGCCGATCGGCCGCACAGCATCGATGGCCCGGTTGAAGCCGGCGAAGCCTGCCT < 2:367409/103‑1 GTATACCGACGGCTTGACCAACGAGCCGATCGGCCGCACAGCATCGATGGCCCGGTTGAAGCCGGCGAAGCCTGCCTGGCGGGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAG > 1:97861/1‑150 GCCGATCGGCCGCACAGCATCGATGGCCCGGTTGAAGCCGGCGAAGCCTGCCTGGCGGGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCA < 2:97861/150‑1 CCGATCGGCCGCACAGCATCGATGGCCCGGTTGAAGCCGGCGAAGCCTGCCTGGCGGGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAG < 2:953945/150‑1 CTGGCGGGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCG > 1:394900/1‑85 CTGGCGGGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCG < 2:394900/85‑1 TGGCGGGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATCGATGCTGTGCGGCCGATCGGCTCGT < 2:1072661/150‑1 GGCGGGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATCGATGCTGTGCGGCCGATCGGCTCGTT < 2:706102/150‑1 GCGGGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATCGATGCTGTGCGGCCGATCGGCTCGTTG < 1:47077/150‑1 GGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATCGATGCTGTGCGGCCGATCGGCTCGTTGGTC > 1:1127114/1‑150 GGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATCGATGCTGTGCGGCCGATCGGCTCGTTGGTC < 1:557652/150‑1 GGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATC < 1:973278/120‑1 GGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATC > 2:973278/1‑120 TTGCTCGGCTGCTCCAGCGCAGTCAGGTATACCGACGGCTTGACCAACGAGCCGATCGGCCGCACAGCATCGATGGCCCGGTTGAAGCCGGCGAAGCCTGCCTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5321855‑5321962‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcggGCCGCAAGGGGGCAGACGATGTGGAAGCGGCGATGGTCGTGACCAACCCTGAGACCGGTGAAGTACAGGCGCTGATCGGTAGCCGCCAGGCAGGCTTCGCCGGCTTCAACCGGGCCATCGATGCTGTGCGGCCGATCGGCTCGTTGGTC < NC_002947/5322044‑5321896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |