| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5634754 | 45 (1.040) | 4 (0.100) | 4/242 | NT | 8.5% | intergenic (+279/+104) | putA/PP_5718 | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein |
| ? | NC_002947 | = 5634797 | 43 (1.040) | intergenic (+322/+61) | putA/PP_5718 | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein | |||||
TGTCTTCTGTTGTTACCGTTTATCCCCTGGAAATTCTCGGCTGCCTGGGCCGGTCCTTTCGCGGGTAAACCCGCCCCTATACACATGCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5634600‑5634754‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcGCTTCCACTTGCCTTAATACGGTGGTGGCGGCAACAGTGAACGGCGGGTAGAAATTGGCCAGCAGGTCCGGCCTCTTCGCGGGTGAACCCGCTCCTACACGACGGCCTGTGCATGTGTATAGGGGCGGGTTTACCCGCGAAAGG < NC_002947/5634797‑5634654 TGTCTTCTGTTGTTACCGTTTATCCCCTGGAAATTCTCGGCTGCCTGGGCCGGTCCTTTCGCGGGTAAACCCGCCCCTATACACATGCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTA < 1:817327/150‑1TGTCTTCTGTTGTTACCATTTATCCCCTGGAAATTCTCGGCTGCCTGGGCCGGTCCTTTCGCGGGTAAACCCGCCCCTATACACATGCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAGCTGCTGGCCAATTTCTA > 2:1100693/1‑150 GTCTTCTGTTGTTACCGTTTATCCCCTGGAAATTCTCGGCTGCCTGGGCCGGTCCTTTCGCGGGTAAACCCGCCCCTATACACATGCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTAC < 1:741854/150‑1 TTCTGTTGTTACCGTTTATCCCCTGGAAATTCTCGGCTGCCTGGGCCGGTCCTTTCGCGGGTAAACCCGCCCCTATACACATGCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTACCCG > 1:828184/1‑150 ACATGCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTACCCGCGCTTCCACTTGCCTTAATACGGTGGTGGCGGCAACAGTGAACGGCGG < 1:142344/120‑1 ACATGCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTACCCGCGCTTCCACTTGCCTTAATACGGTGGTGGCGGCAACAGTGAACGGCGG > 2:142344/1‑120 GCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTACCCGCGCTTCCACTTGCCTTAATACGGTGGTGGCGGCAACAGTGAACGGCGGGTAGAAA < 1:672940/123‑1 GCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTACCCGCGCTTCCACTTGCCTTAATACGGTGGTGGCGGCAACAGTGAACGGCGGGTAGAAA > 2:672940/1‑123 ACCCGCGCTTCCACTTGCCTTAATACGGTGGTGGCGGCAACAGTGAACGGCGGGTAGAAATTGGCCAGCAGGTCCGGCCTCTTCGCGGGTGAACCCGCTCCTACACGACGGCCTGTGCATGTGTATAGGGGCGGGTTTACCCGCGAAAGG > 1:266102/1‑150 TGTCTTCTGTTGTTACCGTTTATCCCCTGGAAATTCTCGGCTGCCTGGGCCGGTCCTTTCGCGGGTAAACCCGCCCCTATACACATGCACAGGCCGTCGTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGACCTGCTGGCCAATTTCTACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5634600‑5634754‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcGCTTCCACTTGCCTTAATACGGTGGTGGCGGCAACAGTGAACGGCGGGTAGAAATTGGCCAGCAGGTCCGGCCTCTTCGCGGGTGAACCCGCTCCTACACGACGGCCTGTGCATGTGTATAGGGGCGGGTTTACCCGCGAAAGG < NC_002947/5634797‑5634654 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |