New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5644175 = | 33 (0.760) | 3 (0.070) | 3/246 | NT | 9.4% | coding (787/1182 nt) | yhiN | FAD/NAD(P)‑binding domain‑containing oxidoreductase |
? | NC_002947 | 5644213 = | 26 (0.620) | coding (825/1182 nt) | yhiN | FAD/NAD(P)‑binding domain‑containing oxidoreductase |
TTGGCGCGTTCGGCCTGCATCTGTTGCAGCCAGGAAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5644215‑5644175 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcCAACGCCGAACTGAAGACCGTGCTGGGCGAGGTGTTCACCCGCAAGCTGGCCAACTTGCTGGCCGAGCAGTGGTTCGAGTCGAAGCCAATGAAGCAGTACACCCCGGCGGAACTGGCGCAAATCGCCGAAAAGCTGGCGAACTGGCAG > NC_002947/5644213‑5644360 TTGGCGCGTTCGGCCTGCATCTGTTGCAGCCAGGAAAGCGCCAACGCCGAACTGAAGACCGTGCTGGGCGAGGTGTTCACCCGCAAGCTGGCCAACTTGCTGGCCGAGCAGTGGTTCGAGTCGAAGCCAATGAAGCAGTACACCCCGGCG > 1:362796/1‑150 CGCGTTCGGCCTGCATCTGTTGCAGCCAGGAAAGCGCCAACGCCGAACTGAAGACCGTGCTGGGCGAGGTGTTCACCCGCAAGCTGGCCAACTTGCTGGCCGAGCAGTGG < 1:280848/110‑1 CGCGTTCGGCCTGCATCTGTTGCAGCCAGGAAAGCGCCAACGCCGAACTGAAGACCGTGCTGGGCGAGGTGTTCACCCGCAAGCTGGCCAACTTGCTGGCCGAGCAGTGG > 2:280848/1‑110 GCCAACGCCGAACTGAAGACCGTGCTGGGCGAGGTGTTCACCCGCAAGCTGGCCAACTTGCTGGCCGAGCAGTGGTTCGAGTCGAAGCCAATGAAGCAGTACACCCCGGCGGAACTGGCGCAAATCGCAGAAACGCTGGCGAGCTGGCAG > 2:476202/1‑150 TTGGCGCGTTCGGCCTGCATCTGTTGCAGCCAGGAAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5644215‑5644175 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcCAACGCCGAACTGAAGACCGTGCTGGGCGAGGTGTTCACCCGCAAGCTGGCCAACTTGCTGGCCGAGCAGTGGTTCGAGTCGAAGCCAATGAAGCAGTACACCCCGGCGGAACTGGCGCAAATCGCCGAAAAGCTGGCGAACTGGCAG > NC_002947/5644213‑5644360 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |