New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5706735 = | 44 (1.020) | 3 (0.070) | 3/244 | NT | 6.4% | coding (697/4761 nt) | PP_5009 | hypothetical protein |
? | NC_002947 | 5706777 = | 45 (1.080) | coding (739/4761 nt) | PP_5009 | hypothetical protein |
CTGTCCGATCACCGGTCTGTGCGCCCAGGACAACGCCTCGAAGCGATAGCGTTGCGCTAGCTGCCGTTGCAGCGCAGTGGCAAAGCTGGGCAGGTCGACATGGCGACGAACCGAACCGCAGGGCTTGCATTGCAGAACCAGGTTGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5706884‑5706735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggttCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGATCGGACAGCC > NC_002947/5706777‑5706886 CTGTCCGATCACCGGTCTGTGCGCCCAGGACAACGCCTCGAAGCGATAGCGTTGCGCTAGCTGCCGTTGCAGCGCAGTGGCAAAGCTGGGCAGGTCGACATGGCGACGAACCGAACCGCAGGGCTTGCATTGCAGAACCAGGTTGCGGTT < 2:388760/150‑1 CCGAACCGCAGGGCTTGCATTGCAGAACCAGGTTGCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGATCGGACAGCC > 2:437873/1‑150 GAACCGCAGGGCTTGCATTGCAGAACCAGGTTGCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGAT > 1:666093/1‑139 GAACCGCAGGGCTTGCATTGCAGAACCAGGTTGCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGAT < 2:666093/139‑1 CTGTCCGATCACCGGTCTGTGCGCCCAGGACAACGCCTCGAAGCGATAGCGTTGCGCTAGCTGCCGTTGCAGCGCAGTGGCAAAGCTGGGCAGGTCGACATGGCGACGAACCGAACCGCAGGGCTTGCATTGCAGAACCAGGTTGCGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5706884‑5706735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggttCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGATCGGACAGCC > NC_002947/5706777‑5706886 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |