| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5731921 = | 49 (1.130) | 6 (0.150) | 5/240 | NT | 11.7% | coding (691/1206 nt) | hutI | imidazolonepropionase |
| ? | NC_002947 | 5731965 = | 44 (1.080) | coding (647/1206 nt) | hutI | imidazolonepropionase | |||||
CCTGGTGGATGCGGTGGATGCCTTCTGCGAACACCTCGCGTTCTCGCCGGCCCAGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5732012‑5731921‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggccGGCGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACC > NC_002947/5731965‑5732077 CCTGGTGGATGCGGTGGATGCCTTCTGCGAACACCTCGCGTTCTCGCCGGCCCAGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGC > 1:358247/1‑91CCTGGTGGATGCGGTGGATGCCTTCTGCGAACACCTCGCGTTCTCGCCGGCCCAGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGC < 2:358247/91‑1 CTCGCGTTCTCGCCGGCCCAGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGCCGGCGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGC > 1:978233/1‑150 TCGCCGGCCCAGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGCCGGCGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTC > 2:873733/1‑150 CAGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGCCGGCGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCG > 1:251892/1‑150 AGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGCCGGCGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGA > 1:874101/1‑150 AGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGCCGGCGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGA > 1:874347/1‑150 GTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGCCGGCGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACC > 1:963065/1‑150 CCTGGTGGATGCGGTGGATGCCTTCTGCGAACACCTCGCGTTCTCGCCGGCCCAGGTCGAGCGGCTGTTCATCAAGGCGCGCGAACTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5732012‑5731921‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggccGGCGAGAACGCGAGGTGTTCGCAGAAGGCATCCACCGCATCCACCAGGCCTTCGCCGGCCAAGGCCGGCAACATCTCGTCACAGATGTGCGCGATGTAGTCGTCGGCCCGACC > NC_002947/5731965‑5732077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |