New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 941673 = | 39 (0.900) | 7 (0.170) | 5/238 | NT | 15.8% | coding (3952/18933 nt) | PP_0806 | surface adhesion protein |
? | NC_002947 | 941708 = | 38 (0.940) | coding (3917/18933 nt) | PP_0806 | surface adhesion protein |
TACCAGGTCGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGGTGTGATATCCGGG > NC_002947/941524‑941818 | tACCAGGTCGCTGGGGCTGGCGGGCGCAGTGGCCTTGTGTACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGtt > 1:820816/1‑150 (MQ=18) ccgccggcaacagttcgataccgctggagttcacagccccggatatcacaccgcccgaggcggtcaccgacatcctggtcggcccaggtggcacggccctgagtggtcgcggcgagccgggtgccactgtcgacgtgcgtgatgccaaTg > 2:167806‑M1/149‑150 (MQ=255) ccgccggcaacagttcgataccgctggagttcacagccccggatatcacaccgcccgaggcggtcaccgacatcctggtcggcccaggtggcacggccctgagtggtcgccgcgagccgggtgccactgtcgacgtgcgtgatgccaaTg > 1:932398‑M1/149‑150 (MQ=255) aCCAGGTCGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTg < 2:173827/150‑1 (MQ=255) ccAGGTCGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATCGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTgg < 1:866109/150‑1 (MQ=255) acggcacGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTgg < 2:909312/144‑1 (MQ=255) cAGGTCGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGc > 1:323806/1‑150 (MQ=255) aGGTCGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCa > 2:1090259/1‑150 (MQ=255) ggTCGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCAc > 2:66279/1‑150 (MQ=255) cggcaacagttcgataccgctggagttcacagccccggatatcacaccgcccgaggcggtcaccgacatcctggtcggcccaggtggcacggccctgagtggtcgcggcgagccgggtgccactgtcgacgtgcgtgatgccaaTGGCAc > 2:857556‑M1/145‑150 (MQ=255) cGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGa < 1:1081730/150‑1 (MQ=255) gCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGAc < 2:1024345/150‑1 (MQ=255) gCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGAc < 1:83041/150‑1 (MQ=255) gCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGAc < 1:807871/150‑1 (MQ=255) ggCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCacac > 1:408786/1‑150 (MQ=255) gggcgCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGcc > 1:950110/1‑150 (MQ=255) aTTGCAGTGCCGAGGAAGCATTGCCGCTCGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATcacgca < 2:1213/150‑1 (MQ=255) ttGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACAAGAGACGGTCACGGGGCCACTGGCATcacgcac > 1:244378/1‑150 (MQ=18) accgcccgaggcggtcaccgacatcctggtcggcccaggtggcacggccctgagtggtcgcggcgagccgggtgccactgtcgacgtgcgtgatgccaaTGGCACCGACCACACCCGTGCCGATCACGGTGCCAt > 2:237171‑M1/100‑135 (MQ=255) accgcccgaggcggtcaccgacatcctggtcggcccaggtggcacggccctgagtggtcgcggcgagccgggtgccactgtcgacgtgcgtgatgccaaTGGCACCGACCACACCCGTGCCGATCACGGTGCCAt < 1:237171‑M1/36‑1 (MQ=255) cAGTGCCGAGGAAGCATTGCCGCTTGCGTCGATCTGCCTTTTGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTc < 2:820816/150‑1 (MQ=21) gTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGa < 1:592359/150‑1 (MQ=255) gAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGGGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTg < 2:434508/150‑1 (MQ=255) gaggCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGAc < 1:990318/95‑1 (MQ=255) gAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGAc > 2:990318/1‑98 (MQ=255) aaGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATAACGCACGTCGACAGTGGCAc < 1:933696/150‑1 (MQ=255) caccgacatcctggtcggcccaggtggcacggccctgagtggtcgcggcgagccgggtgccactgtcgacgtgcgtgatgccaaTGGCACCGACCACACCCGTGCCGATCACGGTGCCAtt < 1:888855‑M1/37‑1 (MQ=255) caccgacatcctggtcggcccaggtggcacggccctgagtggtcgcggcgagccgggtgccactgtcgacgtgcgtgatgccaaTGGCACCGACCACACCCGTGCCGATCACGGTGCCAtt > 2:888855‑M1/85‑121 (MQ=255) gCGTCGGTCTGCACCAGGCTCAATAGTGCGACCGGCTGAGCGGCCTGGGCGGTATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCTCCCGGCTCGCCGCGa < 2:68229/150‑1 (MQ=18) gTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGAcc > 1:1075632/1‑150 (MQ=255) gTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGAcc > 2:1023943/1‑150 (MQ=255) aCCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGcc > 2:438632/1‑150 (MQ=255) aCCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGATCGCCGCGACCACTCAGGGcc > 1:848571/1‑150 (MQ=255) ccAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGACATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCg > 2:409990/1‑150 (MQ=255) cAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGt < 2:1075632/150‑1 (MQ=255) cAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGt < 2:408786/150‑1 (MQ=255) tCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCAc < 1:14330/117‑1 (MQ=255) tCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCAc > 2:14330/1‑117 (MQ=255) tCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCAc > 1:111873/1‑150 (MQ=255) tCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCAc > 1:275975/1‑150 (MQ=255) aaTTGTTCGCCCGGCTGAGCGGCCGGGGTGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCt > 1:469215/1‑150 (MQ=255) aaTTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTcgccgc > 1:784327/1‑127 (MQ=255) aaTTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTcgccgc < 2:784327/127‑1 (MQ=255) gCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGAc > 2:31741/1‑150 (MQ=255) cccGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGAcc > 2:65861/1‑150 (MQ=255) gCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCg < 1:18795/150‑1 (MQ=255) gCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGAACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCg < 1:18788/150‑1 (MQ=255) ggCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGt < 1:1090259/150‑1 (MQ=255) gCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGcc > 2:920191/1‑150 (MQ=255) atcgatcAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCggg > 1:236841/1‑150 (MQ=255) atcAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGgt < 1:66279/150‑1 (MQ=255) tcAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGgtg > 1:159867/1‑150 (MQ=255) gtcggtgccaaCGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGGTGTGa < 2:552522‑M1/138‑1 (MQ=255) gtcggtgccaaCGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGGTGTGa > 1:552522‑M1/12‑149 (MQ=255) tcggtgccaaCGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGGTGTGata < 2:1021235‑M1/140‑1 (MQ=255) ccGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGGTGTGATATCCggg > 1:751366/1‑150 (MQ=255) ccGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGGTGTGATATCCggg < 2:950110/150‑1 (MQ=255) | TACCAGGTCGCTGGGGCTGGCGGGCGCAGTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCATTGGCATCACGCACGTCGACAGTGGCACCCGGCTCGCCGCGACCACTCAGGGCCGTGCCACCTGGGCCGACCAGGATGTCGGTGACCGCCTCGGGCGGTGTGATATCCGGG > NC_002947/941524‑941818 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |