New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1359309 =51 (1.180)4 (0.100) 4/240 NT 7.5% coding (709/798 nt) PP_1184 dienelactone hydrolase family protein
?NC_002947 1359350 = 50 (1.220)coding (668/798 nt) PP_1184 dienelactone hydrolase family protein

CAGGCGCTAAGGGAGGTGGCGTGGTAACGCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCG  >  NC_002947/1359161‑1359452
                                                                                                                                                    |                                                                                                                                               
aacctggcgtggtgcgggccgatatcctggtcgagcatggtgcggcggacagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtattgaaggggccaagcacggGt                                                                                                                                                >  2:354455‑M1/149‑150 (MQ=255)
   ctggcgtggtgcgggccgatatcctggtcgagcatggtgcggcggacagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtattgaaggggccaagcacggGTTCa                                                                                                                                             >  2:574981‑M1/146‑150 (MQ=255)
   ctggcgtggtgcgggccgatatcctggtcgagcatggtgcggcggacagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtatcgacggggccaaggagggGTTCa                                                                                                                                             <  2:508491‑M1/5‑1 (MQ=255)
               gTGGCGTGGTAACGCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGc                                                                                                                                 <  1:437496/150‑1 (MQ=255)
               gTGGCGTGGTAACGCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGc                                                                                                                                 >  1:80054/1‑150 (MQ=255)
                     tGGTAACGCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCg                                                                                                                           <  2:956637/150‑1 (MQ=255)
                      ggTAACGCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCgg                                                                                                                          >  2:880981/1‑150 (MQ=255)
                        tAACGCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCa                                                                                                                        >  1:268400/1‑150 (MQ=255)
                            gCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCTAAACACTCTCGTCCGCTGCCATCTTATAGACAATGTCCAGCTCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCgg                                                                                                                    >  1:625210/1‑150 (MQ=255)
                            gCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCgg                                                                                                                    >  2:170869/1‑150 (MQ=255)
                              tcgagcatggtgcggcggacagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtattgaaggggccaagcacggGTTCACCGTGGCTCCGCCGATCGGCATCgggg                                                                                                                  <  1:70214‑M1/32‑1 (MQ=255)
                                 ctTTCCCACAACGATCGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCGGCATATCTGCCCAGGAACGCTCGTCCGCTGCCGTGTTATAGTCAATGTCCGGCCCCCCATTTTCACCGTGGCTCAGCCGTTCGGCATCGGGGTTg                                                                                                               <  1:221400/150‑1 (MQ=255)
                                       gtgcggcggacagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtattgaaggggccaagcacggGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAAc                                                                                                         >  2:70214‑M1/110‑150 (MQ=255)
                                       cacaACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAAc                                                                                                         <  2:178559/150‑1 (MQ=255)
                                              aTTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCt                                                                                                  >  1:305142/1‑150 (MQ=255)
                                                 gCAGAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCTCCCCATGTTCAACTTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTgg                                                                                               <  1:635489/150‑1 (MQ=255)
                                                 cagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtattgaaggggccaagcacggGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAAccc                                                                                                       <  1:409868‑M1/43‑1 (MQ=255)
                                                 cagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtattgaaggggccaagcacggGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAAccc                                                                                                       >  2:409868‑M1/100‑142 (MQ=255)
                                                          tttATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCaa                                                                                      <  2:625210/150‑1 (MQ=255)
                                                            tATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATa                                                                                    <  2:80054/150‑1 (MQ=255)
                                                                tGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGa                                                                                <  2:956829/150‑1 (MQ=255)
                                                                    cacCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCCATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGaa                                                                            <  2:186196/150‑1 (MQ=255)
                                                                    cacCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCtt                                                                                                 >  1:1106617/1‑129 (MQ=255)
                                                                    cacCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCtt                                                                                                 <  2:1106617/129‑1 (MQ=255)
                                                                       cttcttGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTgg                                                                                                                                       >  2:831560/1‑88 (MQ=255)
                                                                       cttcttGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTgg                                                                                                                                       <  1:831560/88‑1 (MQ=255)
                                                                       cttcttGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGc                                                                                                   <  1:568605/124‑1 (MQ=255)
                                                                       cttcttGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGc                                                                                                   >  2:568605/1‑124 (MQ=255)
                                                                           ttGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAg                                                                     <  1:880981/150‑1 (MQ=255)
                                                                             gaagaaCGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCACTACTGACGAACTGGTAGtt                                                                   >  2:1099614/1‑150 (MQ=255)
                                                                             gaagaaCGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGtt                                                                   >  2:725834/1‑150 (MQ=255)
                                                                             gaagaaCGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCAGTGCTTGGCCCCTCCAATACTGACCAACTGGTCGtt                                                                   >  2:177126/1‑150 (MQ=255)
                                                                               agaaCGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGACTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                 <  1:14467/150‑1 (MQ=255)
                                                                                     ccTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTgg                                                           <  1:443566/150‑1 (MQ=255)
                                                                                      cTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGc                                                          >  1:792245/1‑150 (MQ=255)
                                                                                        gCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCg                                                        >  1:405911/1‑150 (MQ=255)
                                                                                                 cccAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCAtct                                               <  2:268400/150‑1 (MQ=255)
                                                                                                  ccAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCAtctc                                              >  2:952548/1‑150 (MQ=255)
                                                                                                       aaCGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGTGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCAtct                                               <  2:1057669/144‑1 (MQ=255)
                                                                                                       aaCGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCAtct                                               >  1:1057669/1‑144 (MQ=255)
                                                                                                                   cTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGca                                                      <  2:792516/125‑1 (MQ=255)
                                                                                                                   cTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGca                                                      >  1:792516/1‑125 (MQ=255)
                                                                                                                     gCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCAcc                           >  2:878718/1‑150 (MQ=255)
                                                                                                                      ccTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACct                          >  1:508491/1‑150 (MQ=255)
                                                                                                                              taGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTggg                  <  1:1059633/150‑1 (MQ=255)
                                                                                                                              taGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTggg                  <  1:878718/150‑1 (MQ=255)
                                                                                                                              taGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTggg                  <  1:725834/150‑1 (MQ=255)
                                                                                                                               aGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTgggg                 >  2:672411/1‑150 (MQ=255)
                                                                                                                                 ccAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                 >  2:17792/1‑100 (MQ=255)
                                                                                                                                 ccAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                 <  1:17792/100‑1 (MQ=255)
                                                                                                                                 ccAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTg               >  1:482143/1‑150 (MQ=255)
                                                                                                                                   aaTGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGCACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGCTGAc             >  1:455061/1‑150 (MQ=255)
                                                                                                                                   aaTGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCtt                                        <  2:537125/123‑1 (MQ=255)
                                                                                                                                   aaTGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCtt                                        >  1:537125/1‑123 (MQ=255)
                                                                                                                                      gTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCAt          <  2:305142/150‑1 (MQ=255)
                                                                                                                                         cGGCCCCTAATGTTCATCGTTGTGCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCt       <  2:476277/150‑1 (MQ=255)
                                                                                                                                         cGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCt       <  1:952548/150‑1 (MQ=255)
                                                                                                                                              ccccATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTccg  >  1:294572/1‑150 (MQ=255)
                                                                                                                                               cccATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCaa                                                                                      <  2:406977/65‑1 (MQ=255)
                                                                                                                                               cccATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCaa                                                                                      >  1:406977/1‑65 (MQ=255)
                                                                                                                                                  aTGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                 <  1:679523/83‑1 (MQ=255)
                                                                                                                                                  aTGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                 >  2:679523/1‑83 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
CAGGCGCTAAGGGAGGTGGCGTGGTAACGCCTCCTTTCCCACAACGATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCG  >  NC_002947/1359161‑1359452

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.