New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1359309 =	51 (1.180)	4 (0.100)	4/240	NT	7.5%	coding (709/798 nt)	PP_1184	dienelactone hydrolase family protein
	?	NC_002947	1359350 =	50 (1.220)					coding (668/798 nt)	PP_1184	dienelactone hydrolase family protein

ATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCACCATGCTCGACCAGGATATCGGCCCGCACCACGCCAGGTT  >  NC_002947/1359207‑1359497                                                                                                                                                |                                                                                                                                                    aTTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCt                                                                                                                                               >  1:305142/1‑150 (MQ=255)    gCAGAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCTCCCCATGTTCAACTTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTgg                                                                                                                                            <  1:635489/150‑1 (MQ=255)    cagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtattgaaggggccaagcacggGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAAccc                                                                                                                                                    >  2:409868‑M1/100‑142 (MQ=255)    cagcatggtcaccccacagcaggtggaggcatttaaggccgagatggatgcggccaaggtcaactaccagttcgtcagtattgaaggggccaagcacggGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAAccc                                                                                                                                                    <  1:409868‑M1/43‑1 (MQ=255)             tttATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCaa                                                                                                                                   <  2:625210/150‑1 (MQ=255)               tATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATa                                                                                                                                 <  2:80054/150‑1 (MQ=255)                   tGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGa                                                                                                                             <  2:956829/150‑1 (MQ=255)                       cacCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCCATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGaa                                                                                                                         <  2:186196/150‑1 (MQ=255)                       cacCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCtt                                                                                                                                              >  1:1106617/1‑129 (MQ=255)                       cacCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCtt                                                                                                                                              <  2:1106617/129‑1 (MQ=255)                          cttcttGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGc                                                                                                                                                >  2:568605/1‑124 (MQ=255)                          cttcttGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGc                                                                                                                                                <  1:568605/124‑1 (MQ=255)                              ttGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAg                                                                                                                  <  1:880981/150‑1 (MQ=255)                                gaagaaCGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCACTACTGACGAACTGGTAGtt                                                                                                                >  2:1099614/1‑150 (MQ=255)                                gaagaaCGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGtt                                                                                                                >  2:725834/1‑150 (MQ=255)                                gaagaaCGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCAGTGCTTGGCCCCTCCAATACTGACCAACTGGTCGtt                                                                                                                >  2:177126/1‑150 (MQ=255)                                  agaaCGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGACTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                                                              <  1:14467/150‑1 (MQ=255)                                        ccTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTgg                                                                                                        <  1:443566/150‑1 (MQ=255)                                         cTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGc                                                                                                       >  1:792245/1‑150 (MQ=255)                                           gCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCg                                                                                                     >  1:405911/1‑150 (MQ=255)                                                    cccAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCAtct                                                                                            <  2:268400/150‑1 (MQ=255)                                                     ccAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCAtctc                                                                                           >  2:952548/1‑150 (MQ=255)                                                          aaCGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGTGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCAtct                                                                                            <  2:1057669/144‑1 (MQ=255)                                                          aaCGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCAtct                                                                                            >  1:1057669/1‑144 (MQ=255)                                                                      cTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGca                                                                                                   >  1:792516/1‑125 (MQ=255)                                                                      cTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGca                                                                                                   <  2:792516/125‑1 (MQ=255)                                                                        gCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCAcc                                                                        >  2:878718/1‑150 (MQ=255)                                                                         ccTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACct                                                                       >  1:508491/1‑150 (MQ=255)                                                                                 taGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTggg                                                               <  1:725834/150‑1 (MQ=255)                                                                                 taGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTggg                                                               <  1:1059633/150‑1 (MQ=255)                                                                                 taGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTggg                                                               <  1:878718/150‑1 (MQ=255)                                                                                  aGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTgggg                                                              >  2:672411/1‑150 (MQ=255)                                                                                    ccAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                                                              >  2:17792/1‑100 (MQ=255)                                                                                    ccAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                                                              <  1:17792/100‑1 (MQ=255)                                                                                    ccAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTg                                                            >  1:482143/1‑150 (MQ=255)                                                                                      aaTGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGCACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGCTGAc                                                          >  1:455061/1‑150 (MQ=255)                                                                                      aaTGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCtt                                                                                     <  2:537125/123‑1 (MQ=255)                                                                                      aaTGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCtt                                                                                     >  1:537125/1‑123 (MQ=255)                                                                                         gTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCAt                                                       <  2:305142/150‑1 (MQ=255)                                                                                            cGGCCCCTAATGTTCATCGTTGTGCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCt                                                    <  2:476277/150‑1 (MQ=255)                                                                                            cGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCt                                                    <  1:952548/150‑1 (MQ=255)                                                                                                 ccccATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTccg                                               >  1:294572/1‑150 (MQ=255)                                                                                                  cccATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCaa                                                                                                                                   <  2:406977/65‑1 (MQ=255)                                                                                                  cccATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCaa                                                                                                                                   >  1:406977/1‑65 (MQ=255)                                                                                                     gggttcaccaaccccgatgccgatcggctgagccacggtgaacCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTg                                                   >  2:409868‑M2/44‑142 (MQ=255)                                                                                                     gggttcaccaaccccgatgccgatcggctgagccacggtgaacCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTg                                                   <  1:409868‑M2/99‑1 (MQ=255)                                                                                                     aTGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                                                              <  1:679523/83‑1 (MQ=255)                                                                                                     aTGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGa                                                                                                              >  2:679523/1‑83 (MQ=255)                                                                                                       gttcaccaaccccgatgccgatcggctgagccacggtgaacCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCAc                                         >  2:70214‑M2/42‑150 (MQ=255)                                                                                                                ccccgatgccgatcggcggagccacggtgaacCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCACCATGCTCGa                                <  1:70214‑M2/118‑1 (MQ=255)                                                                                                                   tCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTc                                                                            >  1:646972/1‑103 (MQ=255)                                                                                                                   tCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTc                                                                            <  2:646972/103‑1 (MQ=255)                                                                                                                          aTCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTaaa                                                                                  <  1:906478/90‑1 (MQ=255)                                                                                                                          aTCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTaaa                                                                                  >  2:906478/1‑90 (MQ=255)                                                                                                                           tCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCACCATGCTCGACCAGGATATCg                     <  2:294572/150‑1 (MQ=255)                                                                                                                             ggCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCACCATGCTCGACCAGGATATCGGc                   <  2:792245/150‑1 (MQ=255)                                                                                                                                           tgaacCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCACCATGCTCGACCAGGATATCGGCCCGCACCACGCCAg     >  2:574981‑M2/6‑150 (MQ=255)                                                                                                                                           tgaacCCCTCCTTGGCCCCGTCGATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCACCATGCTCGACCAGGATATCGGCCCGCACCACGCCAg     <  2:508491‑M2/145‑1 (MQ=255)                                                                                                                                              acCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCACCATGCTCGACCAGGATATCGGCCCGCACCACGCCAGGtt  >  2:354455‑M2/3‑150 (MQ=255)                                                                                                                                                |                                                                                                                                                    ATTGCACAATCTTTTATTTGAACACCTTCTTGAAGAACGCCTGCATATCTGCCCAGGAACGCTCGTCCGCTGCCTTGTTATAGCCAATGTCCGGCCCCCCATGTTCACCGTGGCTCAGCCGATCGGCATCGGGGTTGGTGAACCCGTGCTTGGCCCCTTCAATACTGACGAACTGGTAGTTGACCTTGGCCGCATCCATCTCGGCCTTAAATGCCTCCACCTGCTGTGGGGTGACCATGCTGTCCGCCGCACCATGCTCGACCAGGATATCGGCCCGCACCACGCCAGGTT  >  NC_002947/1359207‑1359497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.