New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5030148 | 44 (1.020) | 3 (0.070) | 3/244 | NT | 6.9% | coding (739/1353 nt) | PP_4433 | amino acid MFS transporter |
? | NC_002947 | = 5030172 | 39 (0.940) | coding (763/1353 nt) | PP_4433 | amino acid MFS transporter |
GGGTGGCGCGTTCCATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTGCGCC > NC_002947/5030004‑5030296 | gggTGGCGCGTTCCATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAAtt > 2:715918/1‑150 (MQ=255) tGGCGCGTTCCATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAAttttt < 2:646019/150‑1 (MQ=255) ctaTTCCTGATCGCAGCTCCTCTGGGCGTCACCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATAc < 2:207003/148‑1 (MQ=255) cATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCGAGCGGGCCGGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACa > 1:249449/1‑150 (MQ=255) cATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACa > 2:392777/1‑150 (MQ=255) ttCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGNACCANGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACaag > 1:207003/1‑149 (MQ=255) tGATCGCAGCTCCTCTGGGCGTCATCGCGGTTTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAgg > 2:945264/1‑150 (MQ=255) aTCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGACCGATGATACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGca > 1:1092050‑M2/1‑148 (MQ=255) gCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGcagca < 2:1020354‑M2/150‑6 (MQ=255) ctcctcTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGcctttttgtatttcccaaaaatttcagcaatag < 1:990125‑M1/150‑34 (MQ=255) ctcctcTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGt > 1:43381/1‑150 (MQ=255) tcctcTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTc < 1:839000/150‑1 (MQ=255) ctctGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGc > 1:1008594/1‑150 (MQ=255) tctGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCt > 2:600084/1‑150 (MQ=255) tGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCCGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAg < 2:760152/150‑1 (MQ=255) ggTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTagc < 1:1027619/150‑1 (MQ=255) gTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAACACGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTagca < 1:966957/150‑1 (MQ=255) gcgcACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa < 1:715918/150‑1 (MQ=255) gcgcACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa < 1:600084/150‑1 (MQ=255) gcgcACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTCCTGAAATTACTGGGACGCAATAATATTCATCAGTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa < 1:22360/150‑1 (MQ=255) ccAGGAGCGGGGACCGCCCTGTGTTTCTAGAGTTCGAAAAGAAGGTGGCAAGCGAGCCTGTTCGACCGAAGAGTTCGATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATaa < 2:420544/150‑1 (MQ=255) cAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa > 2:611110/1‑144 (MQ=255) cAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa < 1:611110/144‑1 (MQ=255) cAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAAc > 1:702067/1‑150 (MQ=255) tCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACttatt < 2:43381/150‑1 (MQ=255) cGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACttatta < 1:1020354/150‑1 (MQ=255) aaGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTTTc < 2:545354/109‑1 (MQ=255) aaGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTc > 1:545354/1‑109 (MQ=255) ccccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCctgc > 2:790824/1‑150 (MQ=255) cccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGcctttttgtatttcccaaaaatttcagcaa < 1:1004479‑M1/98‑31 (MQ=255) cccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGcctttttgtatttcccaaaaatttcagcaa > 2:1004479‑M1/1‑68 (MQ=255) cccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAAttttt > 1:559393/1‑76 (MQ=255) cccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAAttttt < 2:559393/76‑1 (MQ=255) cccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTc < 2:244400/102‑1 (MQ=255) cccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAAGACAAAAAGGCAGCATTGTc > 1:244400/1‑102 (MQ=255) ttCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACa < 1:598333/150‑1 (MQ=255) gagCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCg > 2:569265/1‑150 (MQ=255) gAAAAGAAGATGGCAAGCGATCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTAc > 2:626485/1‑150 (MQ=255) gAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTAc > 1:1023245/1‑150 (MQ=255) gaagaTGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCctgc > 2:379362/1‑125 (MQ=255) gaagaTGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCctgc < 1:379362/125‑1 (MQ=255) gCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGaa < 2:963549/150‑1 (MQ=255) gCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGaa < 2:249449/150‑1 (MQ=255) cGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTgg < 2:1008594/150‑1 (MQ=255) gACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCgaga < 1:65855/150‑1 (MQ=255) ccGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATaa > 2:488500/1‑85 (MQ=255) ccGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATaa < 1:488500/85‑1 (MQ=255) cGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACa > 1:1106966/1‑150 (MQ=255) aaGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATg < 1:626485/150‑1 (MQ=255) aaGACTTCGATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGGATACAGGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATg < 2:430999/150‑1 (MQ=255) cTATTGCTGAAATTTTTGGGAAATACAAAAAGGcagcaatagaagtcttcggtcgaacaggctcgcttgccatcttcttttcgagctctagaaacacaggggtgtcttcgatcctggtgcgcaaatagaccgcgatgacgcccagaggag < 1:990125‑M2/150‑118 (MQ=255) ttGCTGAAATTTTTGGGAAATACAAAAAGGcagcaatagaagtcttcggtcgaacaggctcgcttgccatcttcttttcgagctctagaaacacaggg > 2:1004479‑M2/1‑30 (MQ=255) ttGCTGAAATTTTTGGGAAATACAAAAAGGcagcaatagaagtcttcggtcgaacaggctcgcttgccatcttcttttcgagctctagaaacacaggg < 1:1004479‑M2/98‑69 (MQ=255) tgctgcctttttgtatttcccaaaaatttcagcaatagaagtcttcggtcgaacaggctcgcttgccatcttcttttcgagctctagaaacacaggggtgtcttcgatcctggtgcgcaaatagaccgcgatgacgcccagaggagctgc < 2:1020354‑M1/150‑146 (MQ=255) cTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTgcgc < 1:790824/150‑1 (MQ=255) tgcctttttgtatttcccaaaaatttcagcaatagaagtcttcggtcgaacaggctcgcttgccatcttcttttcgagctctagaaacacaggggtatcatcggtcctggtgcgcaaatagaccgcgatgacgcccagaggagctgcgat > 1:1092050‑M1/1‑2 (MQ=255) | GGGTGGCGCGTTCCATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTGCGCC > NC_002947/5030004‑5030296 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |