New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5030148	44 (1.020)	3 (0.070)	3/244	NT	6.9%	coding (739/1353 nt)	PP_4433	amino acid MFS transporter
	?	NC_002947	= 5030172	39 (0.940)					coding (763/1353 nt)	PP_4433	amino acid MFS transporter

TGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTGCGCCTCTGGTTGGAATGTTGGCCATG  >  NC_002947/5030023‑5030318                                                                                                                                                      |                                                                                                                                                   tGATCGCAGCTCCTCTGGGCGTCATCGCGGTTTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAgg                                                                                                                                                    >  2:945264/1‑150 (MQ=255)   aTCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGACCGATGATACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGca                                                                                                                                                  >  1:1092050‑M2/1‑148 (MQ=255)      gCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGcagca                                                                                                                                               <  2:1020354‑M2/150‑6 (MQ=255)          ctcctcTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGt                                                                                                                                           >  1:43381/1‑150 (MQ=255)           tcctcTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTc                                                                                                                                          <  1:839000/150‑1 (MQ=255)             ctctGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGc                                                                                                                                        >  1:1008594/1‑150 (MQ=255)              tctGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCt                                                                                                                                       >  2:600084/1‑150 (MQ=255)                tGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCCGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAg                                                                                                                                     <  2:760152/150‑1 (MQ=255)                             ggTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTagc                                                                                                                        <  1:1027619/150‑1 (MQ=255)                              gTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAACACGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTagca                                                                                                                       <  1:966957/150‑1 (MQ=255)                                      gcgcACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa                                                                                                               <  1:715918/150‑1 (MQ=255)                                      gcgcACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa                                                                                                               <  1:600084/150‑1 (MQ=255)                                      gcgcACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTCCTGAAATTACTGGGACGCAATAATATTCATCAGTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa                                                                                                               <  1:22360/150‑1 (MQ=255)                                           ccAGGAGCGGGGACCGCCCTGTGTTTCTAGAGTTCGAAAAGAAGGTGGCAAGCGAGCCTGTTCGACCGAAGAGTTCGATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATaa                                                                                                          <  2:420544/150‑1 (MQ=255)                                            cAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa                                                                                                               >  2:611110/1‑144 (MQ=255)                                            cAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGaa                                                                                                               <  1:611110/144‑1 (MQ=255)                                            cAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAAc                                                                                                         >  1:702067/1‑150 (MQ=255)                                                 tCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACttatt                                                                                                    <  2:43381/150‑1 (MQ=255)                                                  cGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACttatta                                                                                                   <  1:1020354/150‑1 (MQ=255)                                                    aaGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTTTc                                                                                                                                          <  2:545354/109‑1 (MQ=255)                                                    aaGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTc                                                                                                                                          >  1:545354/1‑109 (MQ=255)                                                          ccccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCctgc                                                                                           >  2:790824/1‑150 (MQ=255)                                                           cccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTc                                                                                                                                          <  2:244400/102‑1 (MQ=255)                                                           cccTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAAGACAAAAAGGCAGCATTGTc                                                                                                                                          >  1:244400/1‑102 (MQ=255)                                                                   ttCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACa                                                                                  <  1:598333/150‑1 (MQ=255)                                                                        gagCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCg                                                                             >  2:569265/1‑150 (MQ=255)                                                                              gAAAAGAAGATGGCAAGCGATCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTAc                                                                       >  2:626485/1‑150 (MQ=255)                                                                              gAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTAc                                                                       >  1:1023245/1‑150 (MQ=255)                                                                                   gaagaTGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCctgc                                                                                           <  1:379362/125‑1 (MQ=255)                                                                                   gaagaTGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCctgc                                                                                           >  2:379362/1‑125 (MQ=255)                                                                                          gCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGaa                                                           <  2:249449/150‑1 (MQ=255)                                                                                          gCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGaa                                                           <  2:963549/150‑1 (MQ=255)                                                                                               cGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTgg                                                      <  2:1008594/150‑1 (MQ=255)                                                                                                          gACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCgaga                                           <  1:65855/150‑1 (MQ=255)                                                                                                            ccGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATaa                                                                                                          <  1:488500/85‑1 (MQ=255)                                                                                                            ccGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATaa                                                                                                          >  2:488500/1‑85 (MQ=255)                                                                                                             cGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACa                                        >  1:1106966/1‑150 (MQ=255)                                                                                                               aaGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATg                                      <  1:626485/150‑1 (MQ=255)                                                                                                               aaGACTTCGATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGGATACAGGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATg                                      <  2:430999/150‑1 (MQ=255)                                                                                                                      cTATTGCTGAAATTTTTGGGAAATACAAAAAGGcagcaatagaagtcttcggtcgaacaggctcgcttgccatcttcttttcgagctctagaaacacaggggtgtcttcgatcctggtgcgcaaatagaccgcgatgacgcccagaggag                               <  1:990125‑M2/150‑118 (MQ=255)                                                                                                                         ttGCTGAAATTTTTGGGAAATACAAAAAGGcagcaatagaagtcttcggtcgaacaggctcgcttgccatcttcttttcgagctctagaaacacaggg                                                                                <  1:1004479‑M2/98‑69 (MQ=255)                                                                                                                         ttGCTGAAATTTTTGGGAAATACAAAAAGGcagcaatagaagtcttcggtcgaacaggctcgcttgccatcttcttttcgagctctagaaacacaggg                                                                                >  2:1004479‑M2/1‑30 (MQ=255)                                                                                                                            cTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTgcgc                         <  1:790824/150‑1 (MQ=255)                                                                                                                               aaaTTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTGCGCctc                      >  1:919382/1‑150 (MQ=255)                                                                                                                                         gAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACAt                                                                     <  1:912509/93‑1 (MQ=255)                                                                                                                                         gAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACAt                                                                     >  2:912509/1‑93 (MQ=255)                                                                                                                                           aaTACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTGCGCCTCTGGTTGGAATGt          <  1:392777/150‑1 (MQ=255)                                                                                                                                                aaaaaGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGc                                                                               <  2:338640/76‑1 (MQ=255)                                                                                                                                                aaaaaGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGc                                                                               >  1:338640/1‑76 (MQ=255)                                                                                                                                                aaaaaGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAg                                                              >  2:362200/1‑93 (MQ=255)                                                                                                                                                aaaaaGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAg                                                              <  1:362200/93‑1 (MQ=255)                                                                                                                                                  aaaGGCAGCATTGTCGCTAGGTGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTGCGCCTCTGGTTGGAATGTTGGCCat   <  1:61751/150‑1 (MQ=255)                                                                                                                                                   aaGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTGCGCCTCTGGTTGGAATGTTGGCCatg  <  2:1106966/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   TGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGAAATTTTTGGGAAATACAAAAAGGCAGCATTGTCGCTAGGGGTTTTGGTAGCAGCACTGAACATAACTTATTATATCCTGCTGGCATACATGCCGACCTACATGCACAAGGAAGTTGGGGCGAGCGAGAACATGTCATTGCTTGCGCCTCTGGTTGGAATGTTGGCCATG  >  NC_002947/5030023‑5030318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.