| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1885721 | 56 (1.290) | 3 (0.070) | 3/240 | NT | 5.5% | coding (346/1488 nt) | rmuC | DNA recombination limiting inversions protein |
| ? | NC_002947 | = 1885747 | 51 (1.250) | coding (372/1488 nt) | rmuC | DNA recombination limiting inversions protein | |||||
GCAGGCCCAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGATTTTCGACGAACGCGAGCAGCGCTTCGCCCAGACCAGCCAGC > NC_002947/1885600‑1885895 | gCAGGCCCAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGTCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGga > 2:357261‑M2/1‑148 (MQ=255) cAGGCCCAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGgac > 2:1101976‑M2/1‑147 (MQ=255) ggCCCAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGgacgc < 2:979286‑M2/150‑6 (MQ=255) ccAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCaga < 2:897236/150‑1 (MQ=255) ccAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGACCACGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCaga > 1:256524/1‑150 (MQ=255) aGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGc > 1:616410/1‑150 (MQ=255) aaGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAAcagca < 1:874714/150‑1 (MQ=255) aGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAAcagcag < 1:399122/150‑1 (MQ=255) aGCCGTGAGCTCGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAAcagcag < 2:586717/150‑1 (MQ=255) gagctggagctgCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGc < 2:388582/150‑1 (MQ=255) agctggagctgCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGcc > 2:461921/1‑150 (MQ=255) gctggagctgCTGCAGATCGATCGCGACAACGCCCGTGATGCAGACCGCGCATACGATTGTT‑AGCGCGCCAATCGCGAAGCCGAACTGCGTTGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGcca < 2:577951/150‑1 (MQ=255) ctggagctgCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGccac > 1:24338/1‑150 (MQ=255) ctggagctgCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGccac > 2:756334/1‑150 (MQ=255) ctgcAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGc > 1:564743/1‑150 (MQ=255) tgcAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGcc > 1:1100542/1‑150 (MQ=255) gcAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCt < 1:1046410/150‑1 (MQ=255) cAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTg < 2:3156/150‑1 (MQ=255) atcgatcgCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGaa < 2:660229/150‑1 (MQ=255) atcgatcgCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGaa < 1:318657/150‑1 (MQ=255) atcgatcgCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTGGAGCGCGCCAATCGCGAAGCCGAACTCCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGCACGCCACCAGCAACGCCTGGaa > 2:475566/1‑150 (MQ=255) tatcccaaCAACGCCCGTGACGACGCCCTCTGCT‑ACAGTCTTGAGTGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGAc < 2:289764/143‑1 (MQ=255) gatcgCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGAc < 2:1100542/150‑1 (MQ=255) gatcgCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGAc < 2:1040432/150‑1 (MQ=255) tcgCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCt > 2:873745/1‑150 (MQ=255) gcgACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACACCATGAAAGCCACCAGCAACGCCTGGAAGAACTga > 2:738088/1‑149 (MQ=255) gACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGGCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGccacc > 2:597129/1‑127 (MQ=255) gACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGccacc < 1:597129/127‑1 (MQ=255) gACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCag < 1:461921/150‑1 (MQ=255) cGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGc < 2:925664/150‑1 (MQ=255) cGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGc < 2:279478/150‑1 (MQ=255) gCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAAcagca > 2:591127/1‑110 (MQ=255) gCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAAcagca < 1:591127/110‑1 (MQ=255) gCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGcc > 1:794520/1‑150 (MQ=255) tGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGa < 1:1058904/150‑1 (MQ=255) gccgccCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACAcc > 1:881712/1‑150 (MQ=255) cACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTgcgc < 1:391361/150‑1 (MQ=255) gCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCCCAAGAAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGcc < 1:815517/150‑1 (MQ=255) cT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTg < 1:1059785/112‑1 (MQ=255) cT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTg > 2:1059785/1‑112 (MQ=255) cT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCa < 2:564743/150‑1 (MQ=255) gcCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTgc > 1:379521/1‑127 (MQ=255) gcCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTgc < 2:379521/127‑1 (MQ=255) aaTCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCCCGCCTCGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGccacc > 1:1106130/1‑150 (MQ=255) tCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGaaa < 2:1075150/74‑1 (MQ=255) tCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGaaa > 1:1075150/1‑74 (MQ=255) gcgAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGa < 2:24338/150‑1 (MQ=255) aGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGAtttt < 1:756334/150‑1 (MQ=255) gAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGgacgcagttcggcttcgcgattggcgcgctcaaggctccaggcgtgggcggcatcacgggcgttgtcgcgatcgatctgcagcagctccagctcacggctttgggcgg > 1:173318‑M2/1‑36 (MQ=255) gAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGgacgcagttcggcttcgcgattggcgcgctcaaggctccaggcgtgggcggcatcacgggcgttgtcgcgatcgatctgcagcagctccagctcacggctttgggcgg < 2:173318‑M2/144‑109 (MQ=255) aaCTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGgacgcagttcggcttcgcgattggcgcgctcaaggctccaggcgtgggcggcatcacgggcgttgtcgcgatcgatctgcagcagctccagctcacggctttgggcggccaactg < 1:857368‑M2/150‑116 (MQ=255) cTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCa > 2:828866/1‑116 (MQ=255) cTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCa < 1:828866/116‑1 (MQ=255) tCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGcc < 2:903059/71‑1 (MQ=255) tCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGcc > 1:903059/1‑71 (MQ=255) tCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGATTTTCGACGAACGCGa < 1:669012/150‑1 (MQ=255) tGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGATTTTCGACGAACGCGagcagc < 1:771748/150‑1 (MQ=255) aGGCGCAAACCGGGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTTACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGATTTTCGACGAACGCGAGCAGCGCt < 2:616410/150‑1 (MQ=255) cgcgcgCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGATTTTCGACGAACGCGAGCAGCGCTTCGCCCAGAc > 1:1046056/1‑150 (MQ=255) gcgcgcCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGATTTTCGACGAACGCGAGCAGCGCTTCGCCCAGAcc > 1:422724/1‑150 (MQ=255) tGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCCACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGATTTTCGACGAACGCGAGCAGCGCTTCGCCCAGACcagccagc < 1:738088/150‑1 (MQ=255) | GCAGGCCCAGTTGGCCGCCCAAAGCCGTGAGCTGGAGCTGCTGCAGATCGATCGCGACAACGCCCGTGATGCCGCCCACGCCT‑GGAGCCTTGAGCGCGCCAATCGCGAAGCCGAACTGCGTCGCCTGGAGGCGCAAACCGCGCGCCTGGACGCAGAGCTGCGTGAACAGCAGGAAAGCCACCAGCAACGCCTGGAAGACCTGCAGGAGGCCCGTGACACCTTGCGCGCCCAGTTCGCCGACATGGCCACCAAGATTTTCGACGAACGCGAGCAGCGCTTCGCCCAGACCAGCCAGC > NC_002947/1885600‑1885895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |