| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5668826 | 33 (0.760) | 6 (0.140) | 4/248 | NT | 16.4% | coding (771/1395 nt) | ahcY | adenosylhomocysteinase |
| ? | NC_002947 | = 5668852 | 29 (0.690) | coding (797/1395 nt) | ahcY | adenosylhomocysteinase | |||||
CCCTGGTGATCGGCTACGGTGACGTGGGCAAGGGCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATGCTCAAGGCCCTGAAAAAGCGTGCCGTAGTCTGCA > NC_002947/5668711‑5668998 | cccTGGGGATCGGCCACGGTGACGTGGGCGAGGGCTCGGCCCAATCCCTGCGTCAAGAAGGCATTATCGTGAAGGTGTCCGAAATTGACCCGATCTGCGCCACGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACg < 2:262799/150‑1 (MQ=255) tGGTGATCGGCTACGGTGACGTGGGCAAGGGCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTa > 1:817742/1‑150 (MQ=255) gACGTGGGCAAGGGCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGaa < 2:407640/150‑1 (MQ=255) ggCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGAc > 1:894878/1‑150 (MQ=255) gCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTcat > 2:726179‑M2/1‑109 (MQ=255) gCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTcat < 1:726179‑M2/112‑4 (MQ=255) gCTCGGCCCAGTCCCTGCGACAGGAAGGCATGATCGTCAAGGTCGCCGAAATTACAGCGAGCTGCTCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCCCCGAAGCCAGCATCGACa > 2:317898/1‑150 (MQ=255) ccAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCct > 2:442857/1‑150 (MQ=255) cAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATc > 2:1085322/1‑138 (MQ=255) cAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATc < 1:1085322/138‑1 (MQ=255) cccGGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTgg < 1:414192/150‑1 (MQ=255) gAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGACGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGAc < 1:196806/150‑1 (MQ=255) aaGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGAcc > 2:286977/1‑150 (MQ=255) cGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGac < 1:133021/150‑1 (MQ=255) ggTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGaccaccac < 1:1103931/150‑1 (MQ=255) tcCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTg > 2:924434/1‑138 (MQ=255) tcCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTg < 1:924434/138‑1 (MQ=255) tcCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGt > 2:681102/1‑150 (MQ=255) aaTTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGt < 1:442857/150‑1 (MQ=255) gACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAAt < 1:286977/150‑1 (MQ=255) cccGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTgg < 2:953029/107‑1 (MQ=255) cccGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTgg > 1:953029/1‑107 (MQ=255) ccGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTc > 1:220477/1‑150 (MQ=255) gtccATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGc > 1:91369/3‑150 (MQ=255) cAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATg > 1:395810/1‑150 (MQ=255) gCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTcatgcaggcctgcatggcgcagatcgggtcaatttcggagaccttgacgatcatgccttcctgacgcagggactgggccgagcccttg < 1:529450‑M2/123‑89 (MQ=255) gCCGGCATGGACGGCTTCGAGCTGGTCTCGCCGTTcatgcaggcctgcatggcgcagatcgggtcaatttcggagaccttgacgatcatgccttcctgacgcagggactgggccgagcccttg > 2:529450‑M2/1‑35 (MQ=255) cTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTcatgcaggcctgcatggcgcagatcgggtcaatttcggagaccttgacgatcatgccttcctga < 2:235939‑M2/97‑65 (MQ=255) cTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTcatgcaggcctgcatggcgcagatcgggtcaatttcggagaccttgacgatcatgccttcctga > 1:790694‑M2/1‑33 (MQ=255) cTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTcatgcaggcctgcatggcgcagatcgggtcaatttcggagaccttgacgatcatgccttcctga > 1:235939‑M2/1‑33 (MQ=255) cTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTcatgcaggcctgcatggcgcagatcgggtcaatttcggagaccttgacgatcatgccttcctga < 2:790694‑M2/97‑65 (MQ=255) tGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATGCTCAAg < 1:1072953/150‑1 (MQ=255) gCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATGCTCAAgg < 2:395810/150‑1 (MQ=255) cTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATGCTCAAGGCCCTGaaaaa < 2:894878/150‑1 (MQ=255) tCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAGTGTCTGCGACGCCAACATGCTCAAGGCCCTGAAAAAGc < 1:951225/150‑1 (MQ=255) aGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATGCTCAAGGCCCTGAAAAAGCGTg > 1:584884/1‑150 (MQ=255) gTCTCGCCGGTCATCGACGGTATCAACGGCGGCCCCGAAGCCAGCATCGACAAGGCGCTGCTGGGGGAGATCGACCTGATGGTGACCACCCCCGGTAACGTCAATGGCTGCGACGCCAACATGCACAGGGCCCTGAAAAGTCGTGCCggg > 2:224698/1‑148 (MQ=255) tcGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATGCTCAAGGCCCTGAAAAAGCGTGCCGTAGTc > 2:94164/1‑150 (MQ=255) cGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCACCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATGCTCAAGGCCCTGAAAAAGCGTGCCGTAGTCTGCa < 1:836428/150‑1 (MQ=255) | CCCTGGTGATCGGCTACGGTGACGTGGGCAAGGGCTCGGCCCAGTCCCTGCGTCAGGAAGGCATGATCGTCAAGGTCTCCGAAATTGACCCGATCTGCGCCATGCAGGCCTGCATGGACGGCTTCGAGCTGGTCTCGCCGTTCATCGACGGTATCAACGACGGCACCGAAGCCAGCATCGACAAGGCCCTGCTGGGCAAGATCGACCTGATCGTGACCACCACCGGTAACGTCAATGTCTGCGACGCCAACATGCTCAAGGCCCTGAAAAAGCGTGCCGTAGTCTGCA > NC_002947/5668711‑5668998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |