New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 458610016 (0.330)15 (0.440) 11/192 2.2 48.0% intergenic (+139/+78) PP_4061/PP_4063 hypothetical protein/long‑chain fatty acid‑‑CoA ligase
?NC_002947 = 4586128 21 (0.610)intergenic (+167/+50) PP_4061/PP_4063 hypothetical protein/long‑chain fatty acid‑‑CoA ligase

GAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCACGCATGCGGAACTTCTGCACCTTGCC  >  NC_002947/4585952‑4586246
                                                                                                                                                    |                                                                                                                                                   
gAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGa                                                                                                                                                    >  1:9004/1‑150 (MQ=255)
      ttAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgc                                                                                                                                              >  2:993146‑M1/1‑143 (MQ=255)
      ttAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgc                                                                                                                                              >  1:244531‑M1/1‑143 (MQ=255)
                 ccACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAAt                                                                                                                                   <  1:514789/150‑1 (MQ=255)
                    cGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATgcg                                                                                                                               <  1:20158/150‑1 (MQ=255)
                         ccGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCt                                                                                                                          <  2:686912/150‑1 (MQ=255)
                          cGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacgg                                                                                                                          <  2:216210‑M1/150‑28 (MQ=255)
                              gTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccc                                                                                                                     >  2:9004‑M2/1‑147 (MQ=255)
                                gAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctg                                                                                                                    <  1:993146‑M1/150‑34 (MQ=255)
                                 aaCAGCTGACCTGCGCTGCGCCGTTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGAATTGCTCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGCCGGTGCCGGCCTTGAATGCGGTGCTGCccctgg                                                                                                                  >  2:83171‑M2/1‑144 (MQ=255)
                                    aGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggta                                                                                                                 <  2:788987‑M1/149‑37 (MQ=255)
                                    aGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggta                                                                                                                 >  1:788987‑M1/1‑113 (MQ=255)
                                     gCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctg                                                                                                                    >  1:1059695‑M1/1‑112 (MQ=255)
                                     gCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctg                                                                                                                    <  2:1059695‑M1/145‑34 (MQ=255)
                                          tCTGCGCTGCTCCATTGAAAGGTTGAGGTTGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTCCATTCGGAACTGCccctggtaggagcgg                                                                                                         >  1:881193‑M2/1‑135 (MQ=255)
                                          tCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgg                                                                                                          <  2:244531‑M1/150‑44 (MQ=255)
                                            tGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCGAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGacagcgccgcattcaaggccggca                                                                                                                             <  2:961928‑M1/129‑25 (MQ=255)
                                            tGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCGAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGacagacccgcattcaaggccggca                                                                                                                             >  1:961928‑M1/1‑105 (MQ=255)
                                            tGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggta                                                                                                                <  2:4215‑M2/141‑9 (MQ=255)
                                            tGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggta                                                                                                                >  1:4215‑M2/1‑133 (MQ=255)
                                                   ctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccg                                                                                                <  1:970411‑M2/150‑25 (MQ=255)
                                                   ctCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccg                                                                                                <  1:793693‑M2/150‑25 (MQ=255)
                                                       aTTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCc                                                                                                                       <  2:460166‑M2/123‑2 (MQ=255)
                                                       aTTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCc                                                                                                                       >  1:460166‑M2/1‑122 (MQ=255)
                                                        ttGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggta                                                                                                                 >  1:212400‑M1/1‑93 (MQ=255)
                                                        ttGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggta                                                                                                                 <  2:212400‑M1/129‑37 (MQ=255)
                                                        ttGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggag                                                                                                            >  2:401232‑M2/1‑121 (MQ=255)
                                                        ttGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggag                                                                                                            <  1:401232‑M2/133‑13 (MQ=255)
                                                         tGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaaga                                                                                          >  2:793693‑M2/1‑120 (MQ=255)
                                                          gAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGGTTGGGCCGGTCTCTTCGCGGGGAGACTCGCTCCTACCAGGGACCGTGCCGTCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagag                                                                                         >  2:284510‑M2/1‑119 (MQ=255)
                                                          gAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagag                                                                                         >  2:970411‑M2/1‑119 (MQ=255)
                                                                                          gTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctg                                                                                                                    <  1:929956‑M1/92‑34 (MQ=255)
                                                                                          gTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctg                                                                                                                    >  2:929956‑M1/1‑59 (MQ=255)
                                                                                                       aTTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtagga                                                                                                             >  1:758662‑M2/1‑74 (MQ=255)
                                                                                                       aTTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtagga                                                                                                             <  2:758662‑M2/85‑12 (MQ=255)
                                                                                                                 ccggccTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggt                                                                                                                  <  2:541769‑M1/71‑36 (MQ=255)
                                                                                                                 ccggccTCTTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggt                                                                                                                  >  1:541769‑M1/1‑36 (MQ=255)
                                                                                                                      ctctTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttc                              >  2:970411‑M1/1‑31 (MQ=255)
                                                                                                                      ctctTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggacggcacggtccctggtaggagcgagtctccccgcgaagagaccggcccaaccaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttc                              >  2:284510‑M1/1‑31 (MQ=255)
                                                                                                                       tctTCGCGGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttca                             >  2:793693‑M1/1‑30 (MQ=255)
                                                                                                                         ttCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggta                                                                                                                >  2:1075602‑M2/1‑56 (MQ=255)
                                                                                                                         ttCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggta                                                                                                                <  1:1075602‑M2/64‑9 (MQ=255)
                                                                                                                         ttCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCACg                          >  1:935197/1‑150 (MQ=255)
                                                                                                                             cgGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggag                       <  1:970411‑M1/150‑127 (MQ=255)
                                                                                                                             cgGGTAAACCCGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggag                       <  1:793693‑M1/150‑127 (MQ=255)
                                                                                                                              gggTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCACGCAtac                     >  2:784422/1‑148 (MQ=255)
                                                                                                                                    aCCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCcgc                                                                                >  1:35197/1‑85 (MQ=255)
                                                                                                                                    aCCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCcgc                                                                                <  2:35197/85‑1 (MQ=255)
                                                                                                                                     cccGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGCTCTCAc                           <  2:321380/137‑1 (MQ=11)
                                                                                                                                     cccGCTCCTACCAGGGGCAGCGCCGCATTCAAGGCCGGCACGGTCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCAc                           >  1:321380/1‑137 (MQ=14)
                                                                                                                                      ccGCTCCTACCAGGGgcagttccgaatggaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcaacctcaacctttcaatggagcagcgcaga              >  1:881193‑M1/1‑15 (MQ=255)
                                                                                                                                      ccGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagc                                                                                                            >  2:389513‑M1/1‑15 (MQ=255)
                                                                                                                                      ccGCTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagc                                                                                                            <  1:389513‑M1/56‑42 (MQ=255)
                                                                                                                                      ccGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgcaga             <  2:244531‑M2/150‑108 (MQ=255)
                                                                                                                                      ccGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCACGCATGCGGAACTTc             >  1:1007679/1‑150 (MQ=255)
                                                                                                                                        gCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgg                                                                                                         >  2:389513‑M2/1‑41 (MQ=255)
                                                                                                                                        gCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgg                                                                                                         <  1:389513‑M2/56‑16 (MQ=255)
                                                                                                                                         cTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaa                            >  2:401232‑M1/1‑12 (MQ=255)
                                                                                                                                         cTCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaa                            <  1:401232‑M1/133‑122 (MQ=255)
                                                                                                                                          tCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaat                                                                           >  1:758662‑M1/1‑11 (MQ=255)
                                                                                                                                          tCCTACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaat                                                                           <  2:758662‑M1/85‑75 (MQ=255)
                                                                                                                                            cTACCCGGGACCGTGCCGTCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCACGCATGCGGAACTTCTGCAcc       <  2:935197/150‑1 (MQ=255)
                                                                                                                                             tACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgca                >  1:4215‑M1/1‑8 (MQ=255)
                                                                                                                                             tACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgca                <  2:4215‑M1/141‑134 (MQ=255)
                                                                                                                                             tACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaa                                                                                             >  2:1075602‑M1/1‑8 (MQ=255)
                                                                                                                                             tACCAGGGgcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaa                                                                                             <  1:1075602‑M1/64‑57 (MQ=255)
                                                                                                                                             tACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgcagatcagct       <  2:788987‑M2/149‑114 (MQ=255)
                                                                                                                                             tACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgcagatcagct       >  1:788987‑M2/1‑36 (MQ=255)
                                                                                                                                             tACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaa                           <  2:212400‑M2/129‑94 (MQ=255)
                                                                                                                                             tACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaa                           >  1:212400‑M2/1‑36 (MQ=255)
                                                                                                                                              aCCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccgg                                                                                    <  2:541769‑M2/71‑37 (MQ=255)
                                                                                                                                              aCCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccgg                                                                                    >  1:541769‑M2/1‑35 (MQ=255)
                                                                                                                                               ccAGGGgcagcaccgcattcaaggccggcaccggccctggtaggagcgggtttacccgcgaagaggccggcccgagcaattcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaacggcgcagcgcaggtcagctgtt     >  2:83171‑M1/1‑6 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgcagatcagctgttc   <  1:993146‑M2/150‑118 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgcagatcagc        >  1:1059695‑M2/1‑33 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgcagatcagc        <  2:1059695‑M2/145‑113 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcac                                                             <  1:929956‑M2/92‑60 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcac                                                             >  2:929956‑M2/1‑33 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGAt                                >  1:965025/1‑121 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGAt                                <  2:965025/121‑1 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCACGCATGCGGAACTTCTGCACCTTGc   >  2:998946/1‑150 (MQ=255)
                                                                                                                                                cAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCACGCATGCGGAACTTCTGCACCTTGc   >  2:1198485/1‑150 (MQ=255)
                                                                                                                                                  ggggcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaatggagcagcgcagatcagctgttcac  >  2:9004‑M1/1‑3 (MQ=255)
                                                                                                                                                    ggcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaat                           >  1:460166‑M1/1‑1 (MQ=255)
                                                                                                                                                    ggcagcgccgcattcaaggccggcacggtccctggtaggagcgggtttacccgcgaagaggccggcccgatcaatgcaagatcttcaccttgccaagcacccggtcatcctcaacctttcaat                           <  2:460166‑M1/123‑123 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GAAGGCTTAAGGGTAGACCACGGCACCGGCGTGAACAGCTGATCTGCGCTGCTCCATTGAAAGGTTGAGGATGACCGGGTGCTTGGCAAGGTGAAGATCTTGCATTGATCGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACCAGGGACCGTGCCGGCCTTGAATGCGGCGCTGCCCCTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGCGCCAGCACATCAACCCGCAGATGCAGCCGCAATCTCCGCCACACTGATCTCACGCATGCGGAACTTCTGCACCTTGCC  >  NC_002947/4585952‑4586246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.