| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 15123 | 36 (0.680) | 6 (0.120) | 4/232 | NT | 14.5% | coding (1794/2421 nt) | gyrB | DNA gyrase subunit B |
| ? | NC_002947 | = 15128 | 37 (0.750) | coding (1799/2421 nt) | gyrB | DNA gyrase subunit B | |||||
ATCAAGGACGATGAGGCCATGGAAGAGTACATGACCCAGTCGGCTCTGGAAGATGCCAGCCTGCACCTGGACGAATCGGCGCCAGCAGTTTCCGGCGTGCAGCTGGAAGCGCTGGTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/14971‑15123‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcgcGACAGGCGCTTGAGAGTCTTCATGACACTACGGAACTCATTCACCAGCGCTTCCAGCTGCACGCCGGAAACTGCTGGCGCCGATTCGTCCAGGTGCAGGCTGGCATCTTCCAGAGCCGACTGGGTCATGTACTCTTCCATGGCCTCATC < NC_002947/15128‑14980 ATCAAGGACGATGAGGCCATGGAAGAGTACATGACCCAGTCGGCTCTGGAAGATGCCAGCCTGCACCTGGACGAATCGGCGCCAGCAGTTTCCGGCGTGCAGCTGGAAGCGCTGGTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAG > 2:745936/1‑150 GGCCATGGAAGAGTACATGACCCAGTCCGCTCTGGAAGATGCCAGCCTGCACCTGGACGAATCGGCGCCAGCAGTTTCCGGCGTGCAGCTGGAAGCGCTGGTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGCGACAGGCGCTT < 1:870726/150‑1 ATGGAAGAGTACATGACCCAGTCGGCTCTGGAAGATGCCAGCCTGCACCTGGACGAATCGGCGCCAGCAGTTTCCGGCGTGCAGCTGGAAGCGCTGGTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGCGACAGGCGCTTGAGA < 1:1118487/150‑1 GGCGTGCAGCTGGAAGCGCTGGTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGCGACAGGCGCTTGAGA > 1:751460/1‑75 GGCGTGCAGCTGGAAGCGCTGGTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGCGACAGGCGCTTGAGA < 2:751460/75‑1 GTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGCGACAGGCGCTTGAGA < 1:1022927/54‑1 GTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGCGACAGGCGCTTGAGA > 2:1022927/1‑54 GCGCGACAGGCGCTTGAGAGTCTTCATGACACTACGGAACTCATTCACCAGCGCTTCCAGCTGCACGCCGGAAACTGCTGGCGCCGATTCGTCCAGGTGCAGGCTGGCATCTTCCAGAGCCGACTGGGTCATGTACTCTTCCATGGCCTC > 1:1293384/1‑150 GCGCGACAGGCGCTTGAGAGTCTTCATGACACTACGGAACTCATTCACCAGCGCTTCCAGCTGCACGCCGGAAACTGCTGGCGCCGATTCGTCCAGGTGCAGGCTGGCATCTTCCAGAGCCGACTGGGTCATGTACTCTTCCATGGCCTC > 1:289699/1‑150 GCGACAGGCGCTTGAGAGTCTTCATGACACTACGGAACTCATTCACCAGCGCTTCCAGCTGCACGCCGGAAACTGCTGGCGCCGATTCGTCCAGGTGCAGGCTGGCATCTTCCAGAGCCGACTGGGTCATGTACTCTTCCATGGCCTCAT < 2:512167/150‑1 CGACAGGCGCTTGAGAGTCTTCATGACACTACGGAACTCATTCACCAGCGCTTCCAGCTGCACGCCGGAAACTGCTGGCGCCGATTCGTCCAGGTGCAGGCTGGCATCTTCCAGAGCCGACTGGGTCATGTACTCTTCCATGGCCTCATC > 1:180903/1‑150 ATCAAGGACGATGAGGCCATGGAAGAGTACATGACCCAGTCGGCTCTGGAAGATGCCAGCCTGCACCTGGACGAATCGGCGCCAGCAGTTTCCGGCGTGCAGCTGGAAGCGCTGGTGAATGAGTTCCGTAGTGTCATGAAGACTCTCAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/14971‑15123‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagcgcGACAGGCGCTTGAGAGTCTTCATGACACTACGGAACTCATTCACCAGCGCTTCCAGCTGCACGCCGGAAACTGCTGGCGCCGATTCGTCCAGGTGCAGGCTGGCATCTTCCAGAGCCGACTGGGTCATGTACTCTTCCATGGCCTCATC < NC_002947/15128‑14980 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |