| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 90359 = | 82 (1.560) | 6 (0.130) | 5/214 | NT | 7.9% | intergenic (+34/+88) | PP_0079/PP_0080 | transcriptional regulator/hypothetical protein |
| ? | NC_002947 | 90414 = | 69 (1.510) | intergenic (+89/+33) | PP_0079/PP_0080 | transcriptional regulator/hypothetical protein | |||||
CAGGATCGCAGCGGGGATGGTGGACATGCTGGAGCTGGACTTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/90522‑90359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGCCAGCCCAGGCTCCAG > NC_002947/90414‑90560 CAGGATCGCAGCGGGGATGGTGGACATGCTGGAGCTGGACTTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTG > 1:1200189/1‑150 AGGATCGAAGCGGGGATGGTGGACATGCTGGAGCTGGACTTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGT < 1:768113/150‑1 GGATCGCAGCGGGGATGGTGGACATGCTGGAGCTGGACTTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTG < 2:821806/150‑1 ATCGCAGCGGGGATGGTGGACATGCTGGAGCTGGACTTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGG > 2:859869/1‑150 CAGCGGGGATGGTGGACATGCTGGAGCTGGACTTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCG > 1:1325695/1‑150 AGCGGGGATGGTGGACATGCTGGAGATGAGGGTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGG > 1:37248/1‑150 GCGGGGATGGTGGACATGCTGGAGCTGGACTTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCCCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCGGCGCCACTGTGCGACCGGC > 2:257266/1‑150 GGGATGGTGGACATGCTGGAGCTGGAATTGCACCGGAGCGAG‑ACATAAACTTTGATGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTT < 2:37248/150‑1 ACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGA > 2:702288/1‑99 ACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGA < 1:702288/99‑1 GCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGTGTCGCGATGGGCCGCAAAGCGGCCCC‑AAAATCTCGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCC < 1:973029/150‑1 GCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATC > 1:717449/1‑150 GCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGC > 2:1109853/1‑150 ACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCT > 1:1295513/1‑150 ACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAG > 2:201375/1‑93 ACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAG < 1:201375/93‑1 ACTGTGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGC > 1:437479/1‑150 TGGGAGCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGATCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGCCAGC < 1:449723/150‑1 GGGAGCGGCCTTGCGTCGCGATGGGCTGAGCCGCAGCCGCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGCCAGCC < 2:473735/150‑1 GCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGCCAGCCCAGG < 2:437479/150‑1 GCGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGCCAGCCCAGG < 2:860805/150‑1 CGGCCTTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGCCAGCCCAGGC < 2:1229103/150‑1 TTGCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGCCAGCCCAGGCTCCAG > 1:781971/1‑150 CAGGATCGCAGCGGGGATGGTGGACATGCTGGAGCTGGACTTGCACCGGAGCGAGCACCTGAACTTCG‑TGGTCTAGATTGCCGGGGCTGCTGCGCAGCCCATCGCGACGCAAGGCCGCTCCCACATGGGCCGGCGTGTGCAGTGCCACTGTGGGAGCGGCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/90522‑90359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcggccttgCGTCGCGATGGGCTGCGCAGCAGCCCCGGCAATCTAGACCACGAAGTTCAGGTGCTCGCTCCGGTGCAAGTCCAGCTCCAGCATGTCCACCATCCCCGCTGCGATCCTGGACAAGCGCCGCAACGGCTCAGCCAGCCCAGGCTCCAG > NC_002947/90414‑90560 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |