| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 363530 = | 60 (1.140) | 4 (0.090) | 4/212 | NT | 7.4% | intergenic (‑45/+122) | lcdH/PP_0303 | L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme |
| ? | NC_002947 | 363623 = | 49 (1.080) | intergenic (‑138/+29) | lcdH/PP_0303 | L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme | |||||
CCCGGCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/363694‑363530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggtCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCA > NC_002947/363623‑363767 CCCGGCAGAGGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGC < 1:1406641/150‑1CCCGGCAAAAGGCCGGGAAAAAATCAACCTCAAGCGCCGCTGATCCTTTCACCGATCGCAAATGCGCCTAACGCCCTTTGGGAGCTGGGGTGCCCGTGAAGGAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGC < 2:379521/150‑1 GCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGC > 2:476097/1‑150 GCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGC > 2:1387916/1‑150 AGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGTTCCCA < 2:1269059/150‑1 GCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACA < 2:1365363/150‑1 CCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTG < 1:420987/133‑1 CCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTG > 2:420987/1‑133 CCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCG > 2:1422038/1‑131 CCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCG < 1:1422038/131‑1 GCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCAT > 2:106635/1‑150 CCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTG > 2:18401/1‑150 CCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTG > 2:322672/1‑150 GCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCT < 1:394912/150‑1 CTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTG < 1:18401/150‑1 CACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCA < 1:1269059/150‑1 AGGGTCTTCGTCGCGTTGGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCA > 2:707431/1‑150 CCCGGCAGAAGGCCGGGAAAAAATGAACCTCAAGCGCCGCTGATCCTTTCAACGATCGCAAATGCGCCGAAGACCCTGTGGGAGCGGGCGTGCCCGTGAAGCAGGCAACGCGATGGATGGCACCGGCCGTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/363694‑363530‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggtCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTTCCCGGCCTTCTGCCGGGCTGAGCACGCGGCCACCCATGCGGGTGATGATCTCGCTGGCGCGTTCCACCAGTTGGCCATTGCTGGCCAGCA > NC_002947/363623‑363767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |