New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 363530 =60 (1.140)4 (0.090) 4/212 NT 7.4% intergenic (‑45/+122) lcdH/PP_0303 L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme
?NC_002947 363623 = 49 (1.080)intergenic (‑138/+29) lcdH/PP_0303 L‑carnitine dehydrogenase/dehydrocarnitine cleavage enzyme

CACCACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTT  >  NC_002947/363384‑363677
                                                                                                                                                  |                                                                                                                                                   
caccacATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAAccc                                                                                                                                                  >  2:860718/1‑150 (MQ=255)
caccacATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAAccc                                                                                                                                                  >  2:351119/1‑150 (MQ=255)
 tgctggccagcaatggccaactggtggaacgcgccagcgagatcatcacccgcatgggtggccgcgtgctcagcccggcagaaggccgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgccaacgcgacgaagACCCt                                                                                                                                                 >  2:707431‑M1/146‑150 (MQ=255)
 cccacATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCt                                                                                                                                                 >  1:984929/2‑150 (MQ=255)
 accacATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCt                                                                                                                                                 >  2:917561/1‑150 (MQ=255)
  ccacATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCtg                                                                                                                                                >  1:768009/1‑150 (MQ=255)
   cacaTCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCtgt                                                                                                                                               >  1:148145/1‑150 (MQ=255)
    tggccagcaatggccaactggtggaacgcgccagcgagatcatcacccgcatgggtggccgcgtgctcagcccggcagaaggccgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCtgtg                                                                                                                                              <  1:1269059‑M1/8‑1 (MQ=255)
       tCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGa                                                                                                                                           >  1:1060768/1‑150 (MQ=255)
       tCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGa                                                                                                                                           >  2:1045997/1‑150 (MQ=255)
       tCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGa                                                                                                                                           >  1:998170/1‑150 (MQ=255)
        cagcaatggccaactggtggaacgcgccagcgagatcatcacccgcatgggtggccgcgtgctcagcccggcagaaggccgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAg                                                                                                                                          <  1:18401‑M1/12‑1 (MQ=255)
         cAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGc                                                                                                                                         <  1:1045997/150‑1 (MQ=255)
         agcaatggccaactggtggaacgcgccagcgagatcatcacccgcatgggtggccgcgtgctcagcccggcagaaggccgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAGc                                                                                                                                         <  1:394912‑M1/13‑1 (MQ=255)
           caatggccaactggtggaacgcgccagcgagatcatcacccgcatgggtggccgcgtgctcagcccggcagaaggccgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAGCgg                                                                                                                                       >  2:18401‑M1/136‑150 (MQ=255)
           caatggccaactggtggaacgcgccagcgagatcatcacccgcatgggtggccgcgtgctcagcccggcagaaggccgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAGCgg                                                                                                                                       >  2:322672‑M1/136‑150 (MQ=255)
             atggccaactggtggaacgcgccagcgagatcatcacccgcatgggtggccgcgtgctcagcccggcagaaggccgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAGCGGGc                                                                                                                                     >  2:106635‑M1/134‑150 (MQ=255)
                        ggCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGaa                                                                                                                          <  2:1243073/150‑1 (MQ=255)
                             gggCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCACGCGAacacag                                                                                                                     >  2:247409/1‑148 (MQ=255)
                                          gCTCCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGc                                                                                                        <  2:360658/150‑1 (MQ=255)
                                            tGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGcca                                                                                                      >  1:390715/1‑150 (MQ=255)
                                                gATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGccatcca                                                                                                  >  2:821956/1‑150 (MQ=255)
                                                gATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGccatcca                                                                                                  >  2:482184/1‑150 (MQ=255)
                                                 aTCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGccatccat                                                                                                 <  2:805359/150‑1 (MQ=255)
                                                      gccgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGt                                                                                            >  2:602848/1‑150 (MQ=255)
                                                       ccgcTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGtt                                                                                           <  1:821956/150‑1 (MQ=255)
                                                                aGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCAt                                                                                                                                   >  1:432427/1‑101 (MQ=255)
                                                                aGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCAt                                                                                                                                   <  2:432427/101‑1 (MQ=255)
                                                                aGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTc                                                                                  >  1:1239777/1‑150 (MQ=255)
                                                                 gggCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCa                                                                                 <  2:1060768/150‑1 (MQ=255)
                                                                  ggcggcGTAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCAc                                                                                <  1:351119/150‑1 (MQ=255)
                                                                  ggcggcGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCAc                                                                                >  1:1114041/1‑150 (MQ=255)
                                                                       cgAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGACCACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCa                                                                           <  2:1142367/150‑1 (MQ=255)
                                                                            gTTTTGATTTCAGTGATCAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGccc                                                                      <  2:329174/150‑1 (MQ=255)
                                                                            gTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGccc                                                                      <  2:484364/150‑1 (MQ=255)
                                                                              tttGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCcatccatc                                                                                                <  1:288538/122‑1 (MQ=255)
                                                                              tttGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCcatccatc                                                                                                >  2:288538/1‑122 (MQ=255)
                                                                                       cgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACgg                                                                              >  2:1422038‑M1/60‑131 (MQ=255)
                                                                                       cgggaaaaaatgaacctcaagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACgg                                                                              <  1:1422038‑M1/72‑1 (MQ=255)
                                                                                       aGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAgg                                                           <  2:1387265/150‑1 (MQ=255)
                                                                                       aGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAgg                                                           <  2:1239777/150‑1 (MQ=255)
                                                                                       aGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAgg                                                           >  1:121043/1‑150 (MQ=255)
                                                                                             aaaGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTc                                                     <  1:482184/150‑1 (MQ=255)
                                                                                              aaGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCg                                                    <  2:390715/150‑1 (MQ=255)
                                                                                                gggCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGgc                                                  >  1:552137/1‑150 (MQ=255)
                                                                                                  gCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAgg                                                           >  2:195268/1‑139 (MQ=255)
                                                                                                  gCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAgg                                                           <  1:195268/139‑1 (MQ=255)
                                                                                                       gCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTg                                           >  2:1348767/1‑150 (MQ=255)
                                                                                                        caagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAgg                                                           <  1:420987‑M1/91‑1 (MQ=255)
                                                                                                        caagcgccgctgatcctttcaacgatcgcaaatgcgccgaagACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAgg                                                           >  2:420987‑M1/43‑133 (MQ=255)
                                                                                                           gTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACg                                                                               <  2:1281524/110‑1 (MQ=255)
                                                                                                           gTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGAt                                       >  2:71930/1‑150 (MQ=255)
                                                                                                           gTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGGTGCCTGCTTCACg                                                                               >  1:1281524/1‑110 (MQ=255)
                                                                                                            tCCTCAGGGTAAAACACTGTAATCATGTTTCTTTTTTTACCCTATGGGAGCGGGCATGCCCGCGAACAGCCGTACTGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATc                                      <  1:602848/150‑1 (MQ=25)
                                                                                                            tCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATc                                      <  2:998170/150‑1 (MQ=255)
                                                                                                            tCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATc                                      <  2:1114041/150‑1 (MQ=255)
                                                                                                               tCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCgg                                                                                                                    <  2:206938/69‑1 (MQ=255)
                                                                                                               tCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCgg                                                                                                                    >  1:206938/1‑69 (MQ=255)
                                                                                                               tCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGtt                                   <  2:63421/150‑1 (MQ=255)
                                                                                                               tCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACAGGCACGCGCGAACCCAGAGGGGCTTCGGCGCATTTGCGCTCGtt                                   >  2:114553/1‑150 (MQ=37)
                                                                                                                 aGGGTCAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCAGGTGCCATACATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGGATTTGCGATCGtcgc                                 >  2:613544/1‑147 (MQ=37)
                                                                                                                   ggTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGtt                                   >  1:1009479/1‑146 (MQ=255)
                                                                                                                   ggTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGtt                                   <  2:1009479/146‑1 (MQ=255)
                                                                                                                           acaGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAgc                       >  2:1320293/1‑150 (MQ=255)
                                                                                                                             aGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCCTCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAgcgg                     >  1:290220/1‑150 (MQ=255)
                                                                                                                             aGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGCCGCATTTGCGATCGTTGAAAGGATCAgcgc                     <  2:148145/150‑2 (MQ=255)
                                                                                                                                 aTCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCt                 >  2:1283401/1‑150 (MQ=255)
                                                                                                                                  tCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCg                                                    >  1:852709/1‑114 (MQ=255)
                                                                                                                                  tCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCg                                                    <  2:852709/114‑1 (MQ=255)
                                                                                                                                  tCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCtt                >  1:1387916/1‑150 (MQ=255)
                                                                                                                                     gggTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAg             <  1:860718/150‑1 (MQ=255)
                                                                                                                                      ggTTCATGGCTAACCCTGTGGGAGCGGGGATGCCGCCGAACACCGGAACGGCCGCTGCCATCCATCGCGTTGCCTTCTTCACGGGCACGCCCGCTGCCACAGGGGCTTCGGCGCGATTGCGATCGTTCAATGGATCAGCGGCGCtgtagg            >  1:619307/1‑145 (MQ=255)
                                                                                                                                      ggTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGGCTGCTTCACGGGCACGCCCGCTCCCACAGGCTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTCGAgg            >  2:367760/1‑150 (MQ=255)
                                                                                                                                      ggTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAgg            <  1:910858/150‑1 (MQ=255)
                                                                                                                                           aTGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCAt       >  1:502083/1‑150 (MQ=255)
                                                                                                                                             ggCTAACCCTGTGGGAGCGGGCAGGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGGTTGTCGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTCTGACCGTTGAAAGGATCAGCGGCGCTTGAGGTTCAttt     <  1:114553/150‑1 (MQ=37)
                                                                                                                                                tAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCAtttttt  >  1:140234/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CACCACATCCAGGCCATGGGCCAGGGCGCGGGCGACCCAGCCGCTGCCGATCACGCCGCTACCCAGGGCGGCGAAGGTTTTGATTTCAGTGATAAAGGGCATAGCTGGTCCTCAGGGTAAAACACAGTAATCAGGGTTCATGGCTAACCCTGTGGGAGCGGGCATGCCCGCGAACACCGGCACGGCCGGTGCCATCCATCGCGTTGCCTGCTTCACGGGCACGCCCGCTCCCACAGGGTCTTCGGCGCATTTGCGATCGTTGAAAGGATCAGCGGCGCTTGAGGTTCATTTTTT  >  NC_002947/363384‑363677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.