| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 380836 = | 66 (1.260) | 7 (0.160) | 6/200 | NT | 12.8% | intergenic (+23/+86) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 380916 = | 42 (0.980) | intergenic (+103/+6) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer | |||||
CGCATCAGACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/381004‑380836‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcgtgcccgcgaCTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACCAGGTTGCGGTC > NC_002947/380916‑381056 CGCATCAGACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTG < 1:610001/150‑1 CATCAGACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGG > 2:1171451/1‑150 ATCAGACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGA > 2:769681/1‑150 ACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCCCCCACAAGGTTCACCGCAGTCCCGAAGATAGCGATGACAC‑TGTGAGAGCGGG > 2:619080/1‑150 AGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCTCAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGT < 2:237314/150‑1 GCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTG > 2:279140/1‑150 CGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCC < 2:1384226/150‑1 CTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCACGCCCGCtc > 1:1188441/1‑88 CTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCACGCCCGCtc < 2:1188441/90‑3 CACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCG > 2:918883/1‑150 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCG > 1:998749/1‑150 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAG < 1:443478/70‑1 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAG > 2:443478/1‑70 CAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCC < 1:918883/150‑1 GTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGA > 1:866822/1‑93 GTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGA < 2:866822/93‑1 GGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACC < 2:927709/150‑1 GGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACC > 1:1422549/1‑150 GGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGATCGTTGATGTTCACCA > 1:1036846/1‑150 AGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACCAGG < 2:83493/150‑1 GCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTTCACCGACAGGTCGTTGCTGTTCACCACGTTGCG > 2:139466/1‑150 GCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACCAGGTTGCG < 1:723861/150‑1 gcCCCGCGACTGCTCCTAGGCGCGCAACCGGGCTACCAGGCCCTTGGGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGGTGATGTTCCCCAGGTTGCGGTC < 2:418705/148‑1 CCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAaca > 2:1109798/1‑103 CCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAACA < 1:1109798/106‑1 CGCATCAGACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATGACCC‑TGTGGGAGCGGGCGTGCCCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/381004‑380836‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcgtgcccgcgaCTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACCAGGTTGCGGTC > NC_002947/380916‑381056 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |