New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	380836 =	66 (1.260)	7 (0.160)	6/200	NT	12.8%	intergenic (+23/+86)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer
	?	NC_002947	380916 =	42 (0.980)					intergenic (+103/+6)	gbcB/PP_0317	glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer

AAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCG  >  NC_002947/380694‑380979                                                                                                                                               |                                                                                                                                                 aaaCTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGc                                                                                                                                           >  1:604521/1‑150 (MQ=255)  gaccgcaacctggggaacatcaccgacctgtcggtgcagagtgctaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagaccccaagggcctggtagcccggttgcgcgcctaggagcagTCgcggggc                                                                                                                                          <  2:418705‑M1/9‑3 (MQ=255)  aaCTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCa                                                                                                                                          >  1:802845/1‑150 (MQ=255)     cgcaacgtggtgaacagcaacgacctgtcggtgaagagtgctaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGc                                                                                                                                       >  2:139466‑M1/139‑150 (MQ=255)     cgcaacctggtgaacatcaacgacctgtcggtgcagagtgctaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGc                                                                                                                                       <  1:723861‑M1/12‑1 (MQ=255)          cctggtgaacatcaacgacctgtcggtgcagagtgctaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCt                                                                                                                                  <  2:83493‑M1/17‑1 (MQ=255)            tggtgaacatcaacgatctgtcggtgcagagtgctaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCTcc                                                                                                                                >  1:1036846‑M1/132‑150 (MQ=255)             ggtgaacatcaacgacctgtcggtgcagagtgctaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCTccc                                                                                                                               >  1:1422549‑M1/131‑150 (MQ=255)             ggtgaacatcaacgacctgtcggtgcagagtgctaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCTccc                                                                                                                               <  2:927709‑M1/20‑1 (MQ=255)                gTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCgg                                                                                                                                             >  2:585718/1‑133 (MQ=255)                gTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCgg                                                                                                                                             <  1:585718/133‑1 (MQ=255)                 tGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑g                                                                                                                          <  2:739887/150‑1 (MQ=255)                    aaaTGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGt                                                                                                                       <  1:612545/150‑1 (MQ=255)                        ggAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATc                                                                                                                   <  1:437703/150‑1 (MQ=255)                         gAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCg                                                                                                                  >  1:279140/1‑150 (MQ=255)                          aGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGc                                                                                                                 >  2:541799/1‑150 (MQ=255)                           gCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGAGGCCGCGCCCGCTCCCACA‑GGGTCATCGCt                                                                                                                >  1:500/1‑150 (MQ=255)                            cacaACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑gg                                                                                                                         <  1:1034658/140‑1 (MQ=255)                            cacaACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑gg                                                                                                                         >  2:1034658/1‑140 (MQ=255)                                  ggcggGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAAGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCa                                                                                                         <  2:332102/150‑1 (MQ=255)                                     gggATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGa                                                                                                      >  2:288632/1‑150 (MQ=255)                                           tgttaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCgg                                                                                                                                             >  2:1109798‑M1/101‑106 (MQ=255)                                           tgttaccggggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCgg                                                                                                                                             <  1:1109798‑M1/6‑1 (MQ=255)                                            ccGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGt                                                                                               >  2:1303655/1‑150 (MQ=255)                                             cGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTTATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTg                                                                                              >  1:619080/1‑150 (MQ=255)                                             cGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTg                                                                                              >  2:1240577/1‑150 (MQ=255)                                                    ggcgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtg                                                                                       <  1:918883‑M1/59‑1 (MQ=255)                                                      cgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCTCCCACAAGGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtgt                                                                                      >  1:998749‑M1/90‑150 (MQ=255)                                                      cgcatcagaccagcgcggcgagtgccgagctgtcgcgcctggcggtagacctcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtgtg                                                                                     >  2:918883‑M1/90‑150 (MQ=255)                                                       gAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTgg                                                                                    <  2:802845/150‑1 (MQ=255)                                                         aGCCGAGGGCTACATCCTGTCGTGCTGGAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTAGCGTCAGGACTGCGGTGAACCTTGTGGGa                                                                                  <  1:1328260/150‑1 (MQ=255)                                                         aGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGa                                                                                  >  1:441497/1‑150 (MQ=255)                                                          gCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAg                                                                                 <  1:1240577/150‑1 (MQ=255)                                                             gAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtgtg                                                                                     >  1:710633/1‑143 (MQ=255)                                                             gAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtgtg                                                                                     <  2:710633/143‑1 (MQ=255)                                                             gAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCgg                                                                              <  1:166909/150‑1 (MQ=255)                                                               gggCTACATCCTGTCGTGCTGCAGCGTTCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGc                                                                            <  2:1397501/150‑1 (MQ=255)                                                                      aTCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑gg                                                                                                                         <  2:505640/98‑1 (MQ=255)                                                                      aTCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑gg                                                                                                                         >  1:505640/1‑98 (MQ=255)                                                                                gctgcAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTc                                                           <  1:1323894/150‑1 (MQ=255)                                                                                 ctgcAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCg                                                                                                 <  1:1138535/111‑1 (MQ=255)                                                                                 ctgcAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCg                                                                                                 >  2:1138535/1‑111 (MQ=255)                                                                                 ctgcAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCt                                                          >  1:1171451/1‑150 (MQ=255)                                                                                 ctgcAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGCCATCGCTATCTCCAGGACTGCGGTGCAACCTGTGGGAGCGGGCGTGCCCGCGCCTGCTTCt                                                          >  2:1390098/1‑150 (MQ=39)                                                                                   gcAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAg                                                        <  2:148462/150‑1 (MQ=255)                                                                                   gcAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAg                                                        <  1:285872/150‑1 (MQ=255)                                                                                       cGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCCTGCCCGCGACTGCTTCTAGGTGc                                                    <  2:472477/150‑1 (MQ=255)                                                                                        gTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                            <  1:1424430/78‑1 (MQ=255)                                                                                        gTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                            >  2:1424430/1‑78 (MQ=255)                                                                                             gAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCATGATTGCGGTGAACCTTGTGGGGGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAAcc                                              >  1:234943/1‑150 (MQ=255)                                                                                             gAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAAcc                                              <  2:1036639/150‑1 (MQ=255)                                                                                               aaGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCgg                                            >  1:332486/1‑150 (MQ=255)                                                                                                aGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCggg                                           >  2:1121464/1‑150 (MQ=255)                                                                                                       gtgCGGAGCGATTACTGTGCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAg                                    <  2:441497/150‑1 (MQ=255)                                                                                                         tcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAAc                                                                                           <  2:866822‑M1/55‑1 (MQ=255)                                                                                                         tcaatggcctggtagcccggttccgcacctagaagcagTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAAc                                                                                           >  1:866822‑M1/39‑93 (MQ=255)                                                                                                            gATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCAt                               >  1:83493/1‑150 (MQ=255)                                                                                                             gtCGATTAGTGCTCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCCCG‑GGGTCATCCCTGCCCCCAGGACTGCGGTGAACCTCGTGGGAGCGCGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCAtt                              <  1:1390098/149‑1 (MQ=255)                                                                                                                     cTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGCGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCgg                                            <  1:1201373/128‑1 (MQ=255)                                                                                                                     cTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCgg                                            >  2:1201373/1‑128 (MQ=255)                                                                                                                      tGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtgt                                                                                      <  2:971944/85‑1 (MQ=255)                                                                                                                      tGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtgt                                                                                      >  1:971944/1‑85 (MQ=255)                                                                                                                      tGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTAc                     >  2:322350/1‑150 (MQ=255)                                                                                                                      tGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTAc                     >  2:967400/1‑150 (MQ=255)                                                                                                                        aTCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCg                   >  2:410840/1‑150 (MQ=255)                                                                                                                           cAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCg                                                                                                 <  1:718613/69‑1 (MQ=255)                                                                                                                           cAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCg                                                                                                 >  2:718613/1‑69 (MQ=255)                                                                                                                           cAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCa                >  1:696826/1‑150 (MQ=255)                                                                                                                            aGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAg               <  1:410840/150‑1 (MQ=255)                                                                                                                             gTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAgg              >  1:769681/1‑150 (MQ=255)                                                                                                                                gCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGt                                                                          <  2:40136/87‑1 (MQ=255)                                                                                                                                gCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGt                                                                          >  1:40136/1‑87 (MQ=255)                                                                                                                                gCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGgcgc           >  1:97457/1‑150 (MQ=255)                                                                                                                                gCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGgcgc           >  2:812426/1‑150 (MQ=255)                                                                                                                                 ccAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGgcgc           <  2:148119/149‑1 (MQ=255)                                                                                                                                 ccAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGgcgc           >  1:148119/1‑149 (MQ=255)                                                                                                                                  cAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGa         <  1:288632/150‑1 (MQ=255)                                                                                                                                    gTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAAc                                               <  2:321077/110‑1 (MQ=255)                                                                                                                                    gTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAAc                                               >  1:321077/1‑110 (MQ=255)                                                                                                                                     ctagaagcagTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtgt                                                                                      <  1:443478‑M1/60‑1 (MQ=255)                                                                                                                                     ctagaagcagTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTtgt                                                                                      >  2:443478‑M1/11‑70 (MQ=255)                                                                                                                                         gCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGTGGCAGCTCg  >  1:1129970/1‑150 (MQ=255)                                                                                                                                           ttcttcGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGt                                                                          >  1:579618/1‑76 (MQ=255)                                                                                                                                           ttcttcGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGt                                                                          <  2:579618/76‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                 AAACTGGGCGGCGAGGTGGAAATGGAGCACAACGGCGGGATTACCGAAGAGGACGAAGCCGAGGGCTACATCCTGTCGTGCTGCAGCGTGCCGAAAGGGGATGTGCGGATCGATTACTGATCCAGTGGCCAGTCTGGCTTCTTCGCGGGCACGCCCGCTCCCACA‑GGGTCATCGCTATCTTCAGGACTGCGGTGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCG  >  NC_002947/380694‑380979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.