| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 403254 = | 60 (1.140) | 4 (0.090) | 3/216 | NT | 7.3% | intergenic (‑54/+115) | msrA/PP_0337 | peptide methionine sulfoxide reductase MsrA/sensory box protein |
| ? | NC_002947 | = 5162628 | 49 (1.060) | intergenic (+103/+98) | PP_4544/PP_4545 | hypothetical protein/beta‑ketodecanoyl‑ACP synthase | |||||
TGGCCGAGCGGCTGAAGCGCTATCCGCGTGGCCCGGTGGCCTGACAGCTGCGTAATCCTCGGGCACTATAGAAGCCATTCGGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGAACACCACA‑ACCTTTGAAACCTGTGCTGTACCTGTGGGAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/403412‑403254‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcaAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTGTTGCTTAGAACTTGGCTTCCAGGTCTACCTGCAGGGTGTCGACGTCA < NC_002947/5162628‑5162483 TGGCCGAGCGGCTGAAGCGCTATCCGCGTGGCCCGGTGGCCTGACAGCTGCGTAATCCTCGGGCACTATAGAAGCCATTCGGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGAACACCACA‑ACCTTTGAAACCTGTGCTGTACCTGTGG < 2:1407101/150‑1 CCGAGCGGCTGAAGCGCTATCCGCGTGGCCCGGTGGCCTGACAGCTGCGTAATCCTCGGGCACTATAGAAGCCATTCGGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGAACACCACA‑ACCTTTGAAACCTGTGCTGTACCTGTGGGAG < 2:274520/150‑1 CGAGCGGCTGAAGCGCTATCCGCGTGGCCCGGTGGCCTGACAGCTGCGTAATCCTCGGGCACTATAGAAGCCATTCGGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGAACACCACA‑ACCTTTGAAACCTGTGCTGTACCTGTGGGAGC > 2:141180/1‑150 GAGCGGCTGAAGCGCTATCCGCGTGGCCCGGTGGCCTGACAGCTGCGTAATCCTCGGGCACTATAGAAGCCATTCGGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGAACACCACA‑ACCTTTGAAACCTGTGCTGTACCTGTGGGAGCG > 1:1023785/1‑150 TCCCACAGTATCACCACAGACC‑TTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGG > 1:722172/1‑115 TCCCACAGTATCACCACAGACC‑TTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGG < 2:722172/115‑1 TCCCACAGTATCACCACA‑GACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAG > 2:625657/1‑150 ACAGTATCACCACA‑GACCTTGAGAACTGTGCTGTACCTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTG > 1:902074/1‑150 gggttatCCTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTGTTGCTTAGAACTTGGCTTCCAGGTCTAC < 1:519209/143‑1 ACCTGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTGTTGCTTAGAACTTGGCTTCCAGGTCTACCTGCAG < 1:625657/150‑1 TGTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTGTTGCTTAGAACTTGGCTTCCAGGTCTACCTGCAGGGT < 1:921014/150‑1 GTGGGAGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTGTTGCTTAGAACTTGGCTTCCAGGTCTACCTGCAGGGTG > 1:952791/1‑150 AGCGGGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTGTTGCTTAGAACTTGGCTTCCAGGTCTACCTGCAGGGTGTCGAC < 1:1317028/150‑1 GGCAAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTGTTGCTTAGAACTTGGCTTCCAGGTCTACCTGCAGGGTGTCGACGTCA > 2:63880/1‑150 TGGCCGAGCGGCTGAAGCGCTATCCGCGTGGCCCGGTGGCCTGACAGCTGCGTAATCCTCGGGCACTATAGAAGCCATTCGGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGAACACCACA‑ACCTTTGAAACCTGTGCTGTACCTGTGGGAGCGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/403412‑403254‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcaAGCCCGCGAAGGGGCCGGCGCATTTCACACAGACAAAAAGAAGCGGGAAACGCCGGATGGGGTCGGCGTTTCCCGCTTCAGGTGAAGCAGAGCAGGGTGTTGCTTAGAACTTGGCTTCCAGGTCTACCTGCAGGGTGTCGACGTCA < NC_002947/5162628‑5162483 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |