New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	403254 =	60 (1.140)	4 (0.090)	3/216	NT	7.3%	intergenic (‑54/+115)	msrA/PP_0337	peptide methionine sulfoxide reductase MsrA/sensory box protein
	?	NC_002947	= 5162628	49 (1.060)					intergenic (+103/+98)	PP_4544/PP_4545	hypothetical protein/beta‑ketodecanoyl‑ACP synthase

GGGCAGGCTCATTGGCGTGTCGCGGCCAGGCAGGGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGC  >  NC_002947/403108‑403402                                                                                                                                                    |                                                                                                                                                      gggCAGGCTCATTGGCGTGTCGCGGCCAGGCAGGGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGcc                                                                                                                                                    >  2:1000470/1‑150 (MQ=255)  tgacgtcgacaccctgcaggtagacctggaagccaagttctaagcaacaccctgctctgcttcacctgaagcgggaaacgccgaccccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggccccttcgcgggctTGcc                                                                                                                                                    >  2:63880‑M1/147‑150 (MQ=255)     aGGCTCATTGGCGTGTCGCGGCCAGGCAGGGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCt                                                                                                                                                <  1:1044651/150‑1 (MQ=255)      gtcgacaccctgcaggtagacctggaagccaagttctaagcaacaccctgctctgcttcacctgaagcgggaaacgccgaccccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggccccttcgcgggctTGCCCGCt                                                                                                                                                <  1:1317028‑M1/8‑1 (MQ=255)           caccctgcaggtagacctggaagccaagttctaagcaacaccctgctctgcttcacctgaagcgggaaacgccgaccccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggccccttcgcgggctTGCCCGCTCCcac                                                                                                                                           >  1:952791‑M1/138‑150 (MQ=255)            ttGGCGTGTCGCGGCCAGGCAGGGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGAGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                                         <  1:444330/150‑1 (MQ=255)            accctgcaggtagacctggaagccaagttctaagcaacaccctgctctgcttcacctgaagcgggaaacgccgaccccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggccccttcgcgggctTGCCCGCTCCcaca                                                                                                                                          <  1:921014‑M1/14‑1 (MQ=255)               ctgcaggtagacctggaagccaagttctaagcaacaccctgctctgcttcacctgaagcgggaaacgccgaccccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggccccttcgcgggctTGCCCGCTCCCACAGGt                                                                                                                                       <  1:625657‑M1/17‑1 (MQ=255)                 gtgtCGCGGCCAGGCAGGGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACa                                                                                                                                    >  2:931777/1‑150 (MQ=255)                     gtagacctggaagccaagttctaagcaacaccctgctctgcttcacctgaagcgggaaacgccgaccccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggccccttcgcgggctTGCCCGCtcccacaggataaccc                                                                                                                                 <  1:519209‑M1/23‑8 (MQ=255)                      gcgGCCAGGCAGGGCCCGTTCAGCGGTGTGCATACCTTTTTTGTTCACCAGGATTTCCGAACGCAGTCACTAT‑GCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGcaca                                                                                                                               <  1:1315402/150‑1 (MQ=255)                           caggcaggGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGttt                                                                                                                          >  2:713334/1‑150 (MQ=255)                            aggcaggGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGcgaa                                                                                                                                              <  1:1349935/129‑4 (MQ=255)                            aggcaggGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGcgaa                                                                                                                                              >  2:1349935/1‑126 (MQ=255)                              gcaggGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCaa                                                                                                                       >  2:258301/1‑150 (MQ=255)                                aggGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAg                                                                                                                     >  2:1340198/1‑150 (MQ=255)                                   gCCTGTTTCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCTTCTGTGTTTATTCAGTGGGGTAGTGGTTTGGGCCTTCGCGCGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGt‑t                                                                                                                 <  2:271303/150‑1 (MQ=255)                                   gCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAg                                                                                                                              <  1:1174554/138‑1 (MQ=255)                                   gCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAg                                                                                                                              >  2:1174554/1‑138 (MQ=255)                                      tGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑tgtg                                                                                                              <  2:842635/150‑1 (MQ=255)                                      tGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑tgtg                                                                                                              >  1:442331/1‑150 (MQ=255)                                        ttCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATGCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑Tgtggt                                                                                                            >  2:781597/1‑150 (MQ=255)                                                tGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCtgt                                                                                                    <  1:258301/150‑1 (MQ=255)                                                 caccctgctctgcttcacctgaagcgggaaacgccgaccccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggccccttcgcgggctTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTC‑TGTGGTGATACtgt                                                                                                    >  1:902074‑M1/100‑150 (MQ=255)                                                  ggCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTgg                                                                                                  <  2:868476/150‑1 (MQ=255)                                                     ctgctctgcttcacctgaagcgggaaacgccgaccccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggccccttcgcgggctTGCCCGCTCCCACAGGTACAGCACAGTTCTCAAGGTC‑TGTGGTGATACTGTGGGa                                                                                                >  2:625657‑M1/96‑150 (MQ=255)                                                        aCGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGTGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCgg                                                                                            <  1:800001/150‑1 (MQ=255)                                                                    aCCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGa                                                                                >  2:1251473/1‑150 (MQ=255)                                                                      cAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGaaa                                                                              >  2:1067659/1‑150 (MQ=255)                                                                         gATTTCCGAACGCAG‑GATCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCACCCCCAGGTACAGCACAGGTTCCAAAGGT‑TTTGGTATTCCTTTGGGAGCGGGCGTGCCCGCGAAAggg                                                                           <  2:1085597/150‑1 (MQ=38)                                                                         gATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                                         <  1:935455/89‑1 (MQ=255)                                                                         gATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                                         >  2:935455/1‑89 (MQ=255)                                                                           ttgccGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGcc                                                                         <  2:602141/147‑1 (MQ=255)                                                                                gaaagaaG‑GACCATGGCCGTTGCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAAt                                                                    >  2:668062/7‑150 (MQ=255)                                                                                gAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAAt                                                                    >  1:638660/1‑150 (MQ=255)                                                                                gAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAAt                                                                    >  2:1211479/1‑150 (MQ=255)                                                                                gAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAAt                                                                    >  1:242634/1‑150 (MQ=255)                                                                                 aaCGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑tgtg                                                                                                              >  2:890370/1‑107 (MQ=255)                                                                                 aaCGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑tgtg                                                                                                              <  1:890370/107‑1 (MQ=255)                                                                                  aCGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGCGAGGGGGCGTGCCCGCGAAAGGGCCCGAATgg                                                                  <  2:1303899/150‑1 (MQ=255)                                                                                   cGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCAGAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGc                                                                 <  2:343545/150‑1 (MQ=255)                                                                                   cGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGc                                                                 <  2:638660/150‑1 (MQ=255)                                                                                        ccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggcctcttcgcgggctTGCCCGCTCCCACAGGTACAGCACAGTTCTCAA‑GGTCTGTGGTGATACTGTGGGa                                                                                                <  2:722172‑M1/55‑1 (MQ=255)                                                                                        ccatccggcgtttcccgcttctttttgtctgtgtgaaatgcgccggcctcttcgcgggctTGCCCGCTCCCACAGGTACAGCACAGTTCTCAA‑GGTCTGTGGTGATACTGTGGGa                                                                                                >  1:722172‑M1/61‑115 (MQ=255)                                                                                           ccATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGGATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGGGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCtata                                                          <  2:884310/150‑1 (MQ=255)                                                                                           ccATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCtata                                                          <  1:1211479/150‑1 (MQ=255)                                                                                                 ccGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGccc                                                    >  2:1023785/1‑150 (MQ=255)                                                                                                   gTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGa                                                  <  2:442331/150‑1 (MQ=255)                                                                                                     tCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAgg                                                <  1:713334/150‑1 (MQ=255)                                                                                                      ccTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGa                                               <  1:917691/150‑1 (MQ=255)                                                                                                         ctGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGAGTa                                            >  1:892045/1‑150 (MQ=255)                                                                                                          tgtgCTTATTGAGCGGCGTAAGGGTGCGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTAc                                           >  2:525026/1‑150 (MQ=37)                                                                                                           gtgtTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACg                                          <  1:931777/150‑1 (MQ=255)                                                                                                             gtTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGt                                                                                        <  2:1225710/102‑1 (MQ=255)                                                                                                             gtTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGt                                                                                        >  1:1225710/1‑102 (MQ=255)                                                                                                               ttATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGTCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGACCAACAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGc                                      <  1:684819/150‑1 (MQ=39)                                                                                                                  ttCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGt                                   >  1:432276/1‑150 (MQ=255)                                                                                                                  ttCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGt                                   <  2:432276/150‑1 (MQ=255)                                                                                                                    cAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCa                                 <  1:1172068/150‑1 (MQ=255)                                                                                                                     aGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAg                                >  1:1214430/1‑150 (MQ=255)                                                                                                                      gTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTAAGCAGCTGTCAgg                               >  2:576067/1‑150 (MQ=255)                                                                                                                         gggTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCa                            >  2:1264923/1‑150 (MQ=255)                                                                                                                           gTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑tgtg                                                                                                              <  2:1388254/66‑1 (MQ=255)                                                                                                                           gTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑tgtg                                                                                                              >  1:1388254/1‑66 (MQ=255)                                                                                                                           gTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGcc                                                                         >  1:989274/1‑103 (MQ=255)                                                                                                                           gTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGcc                                                                         <  2:989274/103‑1 (MQ=255)                                                                                                                                ggTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGcc                     >  2:724985/1‑150 (MQ=255)                                                                                                                                ggTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGc                      >  2:1399954/1‑149 (MQ=255)                                                                                                                                ggTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGc                      <  1:1399954/149‑1 (MQ=255)                                                                                                                                    tGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTAGAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGGGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCAcgc                 <  1:781597/150‑1 (MQ=255)                                                                                                                                         cTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATa            >  1:953216/1‑150 (MQ=255)                                                                                                                                                   aTGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGc  >  1:141180/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GGGCAGGCTCATTGGCGTGTCGCGGCCAGGCAGGGCCTGTTCCGCAGTGGGCATGACGTTTTTGTTCACCAGGATTTCCGAACGCAG‑GACCATGGCCGTTCCTCTGTGTTTATTCAGTGGGGTAGGGGTTTGGGCCTTCGCGGGCATGCCCGCTCCCACAGGTACAGCACAGGTTTCAAAGGT‑TGTGGTGTTCCTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCCGAATGGCTTCTATAGTGCCCGAGGATTACGCAGCTGTCAGGCCACCGGGCCACGCGGATAGCGCTTCAGC  >  NC_002947/403108‑403402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.