New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 462721 = | 56 (1.070) | 7 (0.140) | 7/234 | NT | 11.8% | coding (682/795 nt) | davA | 5‑aminopentanamidase |
? | NC_002947 | 462754 = | 51 (1.020) | coding (649/795 nt) | davA | 5‑aminopentanamidase |
CATCATCGGCCCGGATGGCAGCTTGCTGGCCATGGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/462761‑462721 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggc‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACGGTCACCTGGCAGGTAAAGTCGTACGGCGTCATGTTCGCCGTCGGCA > NC_002947/462754‑462900 CATCATCGGCCCGGATGGCAGCTTGCTGGCCATGGCCGGGCGGGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACGGTCACCT > 1:485597/1‑150 ATCATCGGCCCGGATGGCAGCTTGCTGGCCATGGCCGGGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACGGTCACCTGG > 1:1321170/1‑150 TCATCGGCCCGGATGGCAGCTTGCTGGCCATGGCCGGGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACG > 1:1340911/1‑140 TCATCGGCCCGGATGGCAGCTTGCTGGCCATGGCCGGGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACG < 2:1340911/140‑1 GCCCGGATGGCAGCTTGCTGGCCATGGCCGGGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACGGTCACCTGGCAGGTAA > 1:1305168/1‑150 CCCGGATGGCAGCTTGCTGGCCATGGCCGGGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACGGTCACCTGGCAGGTAAA < 2:1321170/150‑1 GATGGCAGCTTGCTGGCCATGGCCGGGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACGGTCACCTGGCAGGTAAAGTCG > 2:1354596/1‑150 GGGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTT < 1:1077210/59‑1 GGGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTT > 2:1077210/1‑59 GGC‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACGGTCACCTGGCAGGTAAAGTCGTACGGCGTCATGTTCGCCGTCGGCA < 2:1211567/150‑1 CATCATCGGCCCGGATGGCAGCTTGCTGGCCATGGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/462761‑462721 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggc‑CGATGATGCTGCTCTGCCCGCAATACTCGATCTCGTCTTCCGCGCCGCAGTAGTTGGCATATACCAGGTAGCACTGGTTTTCCTGCGCCCGTGCCCTCACGGTCACCTGGCAGGTAAAGTCGTACGGCGTCATGTTCGCCGTCGGCA > NC_002947/462754‑462900 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |