| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 614270 = | 40 (0.760) | 5 (0.130) | 6/184 | NT | 16.7% | intergenic (‑86/+92) | dxs/ispA | 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase |
| ? | NC_002947 | 614348 = | 20 (0.510) | intergenic (‑164/+14) | dxs/ispA | 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase | |||||
GCCGCACTGCAAGGGTTCGGCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/614439‑614270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgatcctacagggATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTTGGCGGCTTCCAGGCCCAGCAG > NC_002947/614348‑614496 GCCGCACTGCAAGGGTTCGGCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAGCGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGG < 2:69377/150‑1 CGCACTGCAAGGGTTCGGCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGT < 1:1337664/150‑1 AAGGGTTCGGCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGA > 1:873913/1‑150 AGGGTTCGGCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGgt < 1:53710/150‑3 GGGTTCGGCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATC < 1:747361/150‑1 GGGTTCGGCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATC < 1:29748/150‑1 GGCGAAAAGGACAAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCG‑TCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAG < 1:67184/150‑1 GCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACAGG < 1:495873/150‑1 CGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACAGGG < 2:783237/150‑1 GCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGG < 1:1325313/115‑1 GCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGG > 2:1325313/1‑115 TAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACA > 1:405438/1‑92 TAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACA < 2:405438/92‑1 CCCGCGACTGCGACCTCGCATTTGCCGA‑CGCATTCGCGGGTAAACCCGAACCTACAGGGATGGGTCAAGCTGATTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCGCGAGCTTTTCTCCGACCCCTTGCAGT‑GCGG > 2:1277031/1‑150 CCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTT < 2:306465/86‑1 CCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTT > 1:306465/1‑86 CGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGC < 1:1330249/114‑1 CGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGC > 2:1330249/1‑114 agacCGCATTCGCGGGTAAACCCGATGCTACAGGGATAGGTGAAGGTGTTTAGTTACGGCGTTCGACAATATAACGCGCCACGGCACGCAGCGGCTCCGTCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGGCGCGCAGTTCGA < 2:28124/146‑1 CATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGAT > 1:570001/1‑145 CATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGAT < 2:570001/145‑1 ATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATA > 1:405500/1‑150 TTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGCTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAG < 1:69377/150‑1 GCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCT > 2:757544/1‑150 GGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTT < 1:1245860/150‑1 TAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATT < 2:1426439/136‑1 TAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATT > 1:1426439/1‑136 ACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTTGGCGGC > 2:1238944/1‑150 CCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTT < 2:226425/143‑1 CCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTT > 1:226425/1‑143 ATCTTACAGTGATAGGTGAAGCTGTTTAGTTACGGCTTTCGTTAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCTCAGTTTGATTGTATAGGCTTTTGCTGCTTCCA < 2:587298/150‑1 CCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTTGGCGGCTTCCAGG < 1:203047/150‑1 CTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTT > 1:219175/1‑90 CTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTT < 2:219175/90‑1 TACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTTGGCGGCTTCCAGGCC > 2:63489/1‑150 CAGGGATAGGTGCAGCTGTTTAGTTACGGCGTTCGCCAATATGACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTAGACGCC‑GACCCTTGTCGCGCAGTTCGATTGCATAGGCTTTGGCGGCTTCCAGGCCCc > 2:38467/1‑149 AGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTTGGCGGCTTCCAGGCCCAG > 2:208433/1‑150 GGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCA > 2:802305/1‑122 GGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCA < 1:802305/122‑1 GGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGA > 2:1191356/1‑117 GGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGA < 1:1191356/117‑1 GATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTTGGCGGCTTCCAGGCCCAGCAG > 1:1068885/1‑150 GCCGCACTGCAAGGGTTCGGCGAAAAGGCCGAGCCGCTGCGGGCCTTGGCGCGTTATATTGTCGAACGCCGTAACTAAACAGCTTCACCTATCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGA‑CGCATTCGCGGGTAAACCCGATCCTACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/614439‑614270‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcattcgcgggtaaacccgatcctacagggATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGT‑GCGGCCAGCGCCTGGTCGCGCAGTTCGATTGCATAGGCTTTGGCGGCTTCCAGGCCCAGCAG > NC_002947/614348‑614496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |