New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 614270 =40 (0.760)5 (0.130) 6/184 NT 16.7% intergenic (‑86/+92) dxs/ispA 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
?NC_002947 614348 = 20 (0.510)intergenic (‑164/+14) dxs/ispA 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase

CAGCGCGGTCGAGCAACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCG  >  NC_002947/614121‑614419
                                                                                                                                                     |                                                                                                                                                     
ctgctgggcctggaagccgccaaagcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatc                                                                                                                                                       >  1:1068885‑M1/150‑150 (MQ=255)
   ctgggcctggaagccgccaaagcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCt                                                                                                                                                    >  2:208433‑M1/147‑150 (MQ=255)
    ggggcctggaagccgccaaagcctatgcaatcgaactgcgcgacaagggtcggcgtctactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgtcatattggcgaacgccgtaactaaacagctgcacctatCCCTg                                                                                                                                                   >  2:38467‑M1/146‑150 (MQ=255)
      ggcctggaagccgccaaagcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTa                                                                                                                                                 >  2:63489‑M1/144‑150 (MQ=255)
        cctggaagccgccaaagcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAgg                                                                                                                                               <  1:203047‑M1/9‑1 (MQ=255)
          tggaagcagcaaaagcctatacaatcaaactgagcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattaacgaaagccgtaactaaacagcttcacctatCACTGTAAGAt                                                                                                                                             <  2:587298‑M1/11‑1 (MQ=255)
          gAGCAACGGCGTGACCGGGCGTTCGCGGGGGATGTCTTGAAACGTCGTGGGCATCAGGCGAGTAGTTATAAGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGGGGCCCCCTGTAGGAt                                                                                                                                             >  1:587298/1‑150 (MQ=255)
             cAACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCgg                                                                                                                                          <  2:168294/150‑1 (MQ=255)
              aaCGGCGTTACCGGGGGTTGGCGGGGGATCTCTTGAAACGTCGTGGGCATAAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCggg                                                                                                                                         <  2:202979/150‑1 (MQ=255)
               gccgccaaagcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGt                                                                                                                                        >  2:1238944‑M1/135‑150 (MQ=255)
                     aaagcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCggg                                                                                                                                         >  1:226425‑M1/129‑143 (MQ=255)
                     aaagcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCggg                                                                                                                                         <  2:226425‑M1/15‑1 (MQ=255)
                     aaagcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTAccc                                                                                                                                  <  1:1245860‑M1/22‑1 (MQ=255)
                       agcctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCcgc                                                                                                                                >  2:757544‑M1/127‑150 (MQ=255)
                          ctatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgagcgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCCGCGaa                                                                                                                             <  1:69377‑M1/27‑1 (MQ=255)
                           tatgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCCGCGAAt                                                                                                                            >  1:405500‑M1/123‑150 (MQ=255)
                            gCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATg                                                                                                                           <  2:316941/150‑1 (MQ=255)
                             tgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatcc                                                                                                                                                      >  2:802305‑M1/121‑122 (MQ=255)
                             tgcaatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatcc                                                                                                                                                      <  1:802305‑M1/2‑1 (MQ=255)
                                aatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTa                                                                                                                                     >  1:1426439‑M1/118‑136 (MQ=255)
                                aatcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTa                                                                                                                                     <  2:1426439‑M1/19‑1 (MQ=255)
                                 atcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCCGCGAATg                                                                                                                           <  2:570001‑M1/29‑1 (MQ=255)
                                 atcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCCGCGAATg                                                                                                                           >  1:570001‑M1/117‑145 (MQ=255)
                                  tcgaactgcgcgcccaggcgctggccgcactgcaagggttcggcgaaaagacggagccgctgcgtgccgtggcgcgttatattgtcgaacgccgtaactaaacaccttcacctatCCCTGTAGCATCGGGTTTACCCGCGAatgcggtct                                                                                                                     <  2:28124‑M1/35‑5 (MQ=255)
                                  tcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatcc                                                                                                                                                      >  2:1191356‑M1/116‑117 (MQ=255)
                                  tcgaactgcgcgaccaggcgctggccgcactgcaagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatcc                                                                                                                                                      <  1:1191356‑M1/2‑1 (MQ=255)
                                             ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACNCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGa                                                                                                          >  1:753831/1‑150 (MQ=255)
                                             ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCaa                                                                                                            >  2:1215773/1‑148 (MQ=255)
                                             ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCaa                                                                                                            <  1:1215773/148‑1 (MQ=255)
                                               tGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATc                                                                                                        <  2:968449/150‑1 (MQ=255)
                                                      tcgtGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTcg                                                                                                 >  1:849836/1‑150 (MQ=255)
                                                          ccgcactgcaaggggtcggagaaaagctcgcgccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaatcagcttgacccatCCCTGTAGGTTCGGGTTTACCCGCGAATGCGTCGGCAAATGCGAGGTCGCAGTCGCggg                                                                                             >  2:1277031‑M1/92‑150 (MQ=255)
                                                                   gCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGa                                                                                    <  2:849836/150‑1 (MQ=255)
                                                                   aagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAg                                                                                                                                                <  2:219175‑M1/8‑1 (MQ=255)
                                                                   aagggttcggcgaaaaggccgagccgctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAg                                                                                                                                                >  1:219175‑M1/83‑90 (MQ=255)
                                                                     gAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCg                                                                                                                      <  2:1050552/114‑1 (MQ=255)
                                                                     gAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCg                                                                                                                      >  1:1050552/1‑114 (MQ=255)
                                                                        tCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTa                                                                               >  1:614591/1‑150 (MQ=255)
                                                                          gTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGccc                                                                                                                                                       <  2:1153706/76‑1 (MQ=255)
                                                                          gTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGccc                                                                                                                                                       >  1:1153706/1‑76 (MQ=255)
                                                                          gTTATAGGTGTGTGAAGACGCGGCAGATTACCGCATTGTGGGCAAAATCAGCATGCGACCACAGGTTACGCGGCCCCCTGTAGGATCAGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTGCa                                                                             >  1:28124/1‑150 (MQ=37)
                                                                               aGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTAc                                                                                                                                    <  2:912815/90‑1 (MQ=255)
                                                                               aGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTAc                                                                                                                                    >  1:912815/1‑90 (MQ=255)
                                                                                  tgtgtgAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAgg                                                                     <  1:821958/150‑1 (MQ=255)
                                                                                            gctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTcgcg                                                                                               >  2:1330249‑M1/58‑114 (MQ=255)
                                                                                            gctgcgggccttggcgcgttatattgtcgaacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTcgcg                                                                                               <  1:1330249‑M1/57‑1 (MQ=255)
                                                                                            cgcgGCAGTTTACCCCACTGTGGGAAAAGTGCCCATTCGCCCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGAATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGtt                                                           <  2:125786/150‑1 (MQ=255)
                                                                                             gcgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGTACGCATTCGCGGGTTTTCCCGTTCCTACAGGGATAGGTGAAGCTGttt                                                          <  1:106953/150‑1 (MQ=38)
                                                                                              cgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCg                                                                                                                      >  2:735992/1‑89 (MQ=255)
                                                                                              cgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCg                                                                                                                      <  1:735992/89‑1 (MQ=255)
                                                                                               ggCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGtt                                                           <  1:1061075/147‑1 (MQ=255)
                                                                                               ggCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGtt                                                           >  2:1061075/1‑147 (MQ=255)
                                                                                               ggCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGAGCGGGGTTACACGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAg                                                        >  2:1245860/1‑150 (MQ=255)
                                                                                                gCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGGTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGt                                                       >  1:1248250/1‑150 (MQ=255)
                                                                                                     ttACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACgg                                                  <  2:753831/150‑1 (MQ=255)
                                                                                                         cccATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAg                                                                            <  2:278012/120‑1 (MQ=255)
                                                                                                         cccATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAg                                                                            >  1:278012/1‑120 (MQ=255)
                                                                                                              tgtgGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTcgcg                                                                                               <  2:342822/96‑1 (MQ=255)
                                                                                                              tgtgGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTcgcg                                                                                               >  1:342822/1‑96 (MQ=255)
                                                                                                                tgGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAg                                                                            >  2:363006/1‑113 (MQ=255)
                                                                                                                tgGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAg                                                                            <  1:363006/113‑1 (MQ=255)
                                                                                                                  ggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGAGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAatat                                     >  2:1289849/1‑150 (MQ=255)
                                                                                                                         aacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCgg                                                                                              <  2:306465‑M1/58‑1 (MQ=255)
                                                                                                                         aacgccgtaactaaacagcttcacctatCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCgg                                                                                              >  1:306465‑M1/29‑86 (MQ=255)
                                                                                                                           cccATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCa                            >  2:1299063/1‑150 (MQ=255)
                                                                                                                              aTTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGAGTATGCGTCGGCAAATTCAAGATCGCAAGCTCGGGTAAACCCGACCCTACGGGGGTAGGTGAAGCCGTTTTGTGACGGGGTTCGACAATATAACGAGCCACgg                         >  1:96348/1‑150 (MQ=255)
                                                                                                                                    ccACAGGTTACGCGGCCCCCTGTAGGCTAGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCa                   <  2:1248250/150‑1 (MQ=255)
                                                                                                                                    ccACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCa                   >  2:873913/1‑150 (MQ=255)
                                                                                                                                            tACGCGGCCCCCTGTAGGATCGAGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCg           <  1:1289849/150‑1 (MQ=255)
                                                                                                                                               gcgGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGtt                                              <  2:496498/112‑1 (MQ=255)
                                                                                                                                               gcgGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGtt                                              >  1:496498/1‑112 (MQ=255)
                                                                                                                                                    ccccTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTc   >  1:1264675/1‑150 (MQ=255)
                                                                                                                                                     CCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCg  <  2:783237‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CAGCGCGGTCGAGCAACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCG  >  NC_002947/614121‑614419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.