New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	653522 =	76 (1.450)	6 (0.120)	6/234	NT	7.7%	coding (1224/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL
	?	NC_002947	653570 =	72 (1.440)					coding (1176/1962 nt)	ctpL	methyl‑accepting chemotaxis protein CtpL

TGCACGACATCCAGGAGTCGCTCAACCGCCTGCGTCAGTACCTGGTGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/653676‑653522 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTGCAGTTCGCGGTTGGTCTTGCCCAGGGCGATGGCTTGGGCGAA  >  NC_002947/653570‑653716                                                                                                                                                                                                                                                                                                                TGCACGACATCCAGGAGTCGCTCAACCGCCTGCGTCAGTACCTGGTGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGG                                                                                                                                                          >  1:328807/1‑150    ACGACATCCAGGAGTCGCTCAACCGCCTGCGTCAGTACCTGGTGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCG                                                                                                                                                       >  1:1189241/1‑150      GACAGCCAGGAGTCGCTCAACCGCCTGCGTCAGTACCTGGTGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGC                                                                                                                                                     <  2:200022/150‑1                                              TGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGC                                                                                                                                                         >  1:1018037/1‑106                                              TGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGC                                                                                                                                                         <  2:1018037/106‑1                                                                                                         CTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGAT                                                  >  2:1035312/1‑150                                                                                                            GCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTC                                               >  1:685902/1‑150                                                                                                              CGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAG                                                                                   <  1:818949/112‑1                                                                                                              CGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAG                                                                                   >  2:818949/1‑112                                                                                                               GGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTG                                            >  2:102742/1‑150                                                                                                               GGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTG                                            <  2:685902/150‑1                                                                                                                                                      GCCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTGCAGTTCGCGGTTGGTCTTGCCCAGGGCGATGGCTTGGGC     <  1:102742/150‑1                                                                                                                                                       CCGGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTGCAGTTCGCGGTTGGTCTTGCCCAGGGCGATGGCTTGGGCG    <  2:343871/150‑1                                                                                                                                                         GGCCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTGCAGTTCGCGGTTGGTCTTGCCCAGGGCGATGGCTTGGGCGAA  <  2:154294/150‑1                                                                                                                                                                                                                                                                                                                TGCACGACATCCAGGAGTCGCTCAACCGCCTGCGTCAGTACCTGGTGGAGCTGGTCGGCACCATCCGTCATAATGCCGAGCAGGTGGCCGGCAGCAGCCATGCCCTGGCCGGCATGAGCGCTGCGCTGCACGGCGGCGCCGAGCGACAGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/653676‑653522 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcCAGGGCATGGCTGCTGCCGGCCACCTGCTCGGCATTATGACGGATGGTGCCGACCAGCTCCACCAGGTACTGACGCAGGCGGTTGAGCGACTCCTGGATGTCGTGCAGTTCGCGGTTGGTCTTGCCCAGGGCGATGGCTTGGGCGAA  >  NC_002947/653570‑653716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.