| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 668061 = | 29 (0.550) | 3 (0.070) | 3/198 | NT | 8.9% | intergenic (+22/+130) | yfhM/PP_0571 | lipoprotein/membrane protein |
| ? | NC_002947 | 668178 = | 38 (0.900) | intergenic (+139/+13) | yfhM/PP_0571 | lipoprotein/membrane protein | |||||
CTGGGGCTGTGGGTGATGAGCTGGGTGATCCACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/668226‑668061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacgcaaggccgctcccacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAG > NC_002947/668178‑668325 CTGGGGCTGTGGGTGATGAGCTGGGTGATCCACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACG < 2:1116964/150‑1 GGGCTGTGGGTGATGAGCTGGGTGATCCACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAA < 1:411806/150‑1 GGGCTGTGGGTGATGAGCTGGGTGATCCACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGCGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAA < 1:1024754/150‑1 GGGTGATGAGCTGGGTGATCCACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGCCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCT > 1:112267/1‑150 GATGAGCTGGGTGATCCACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCA > 2:1277315/1‑150 TCCACTGATCTGCGCGGTCTTTGCGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCT > 1:309339/1‑132 TCCACTGATCTGCGCGGTCTTTGCGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCT < 2:309339/132‑1 ACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCA < 2:48928/133‑1 ACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCA > 1:48928/1‑133 GGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCAACGCAAGGCC > 1:1404479/1‑114 GGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCAACGCAAGGCC < 2:1404479/114‑1 TTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCT > 2:464839/1‑150 TGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATC < 1:464839/150‑1 AGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCG > 1:929311/1‑150 TCGCGACGCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGA < 2:1263176/150‑1 GCAAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAG < 2:1088873/150‑1 AAGGCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTCCAGCAGCATCAGGCCGATGATCAGGG > 2:323500/1‑150 GCCGCTCCCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCA > 2:690426/1‑150 CCACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGACCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCT > 1:1393504/1‑150 CACAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGAATGAATGCTCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTC < 1:1243632/150‑1 CAAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAG > 2:886382/1‑150 CTGGGGCTGTGGGTGATGAGCTGGGTGATCCACTGATCTGCGCGGTCTTTGTGGGAGCGGCCTTGCGTCGCGACAGGGCTGCACAGCAGCCCCAGGCTTTCAGCTTCGCCGCTTGAATTGTCGGGGCCGCTTTGCGGCCCTATCGCGACGCAAGGCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/668226‑668061‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgacgcaaggccgctcccacaAAGACCGCGCAGATCAGTGGATCACCCAGCTCATCACCCACAGCCCCAGCACCAGCCAGATGATTCCGAGGATGATCGAGGCGCGCATGAATGCGCGGATTGCCGAGTACAGCAGCATCAGGCCGATGATCAGGGCCAGGATGCTCAG > NC_002947/668178‑668325 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |